Aliases for BMS1P16 Gene

Aliases for BMS1P16 Gene

  • BMS1 Pseudogene 16 2 3 5
  • BMS1, Ribosome Biogenesis Factor Pseudogene 16 2 3
  • BMS1 Homolog, Ribosome Assembly Protein Pseudogene 3

External Ids for BMS1P16 Gene

Previous GeneCards Identifiers for BMS1P16 Gene

  • GC15P021368

Summaries for BMS1P16 Gene

GeneCards Summary for BMS1P16 Gene

BMS1P16 (BMS1 Pseudogene 16) is a Pseudogene.

Additional gene information for BMS1P16 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for BMS1P16 Gene

Genomics for BMS1P16 Gene

GeneHancer (GH) Regulatory Elements for BMS1P16 Gene

Promoters and enhancers for BMS1P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J021282 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 18.2 +123.3 123296 3.6 CTCF REST RAD21 TRIM22 SMC3 ZNF316 NFIC FOS DDX20 NFE2 ENSG00000258488 BMS1P16 NBEAP1 ENSG00000259098 OR4N4 OR4M2 lnc-POTEB3-2 piR-38141-001
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BMS1P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BMS1P16 Gene

Genomic Locations for BMS1P16 Gene
chr15:21,160,305-21,167,357
(GRCh38/hg38)
Size:
7,053 bases
Orientation:
Plus strand
chr15:21,365,634-21,372,686
(GRCh37/hg19)
Size:
7,053 bases
Orientation:
Plus strand

Genomic View for BMS1P16 Gene

Genes around BMS1P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BMS1P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BMS1P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BMS1P16 Gene

Proteins for BMS1P16 Gene

Post-translational modifications for BMS1P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BMS1P16 Gene

Domains & Families for BMS1P16 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for BMS1P16 Gene

Function for BMS1P16 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BMS1P16 Gene

Localization for BMS1P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BMS1P16 Gene

Pathways & Interactions for BMS1P16 Gene

PathCards logo

SuperPathways for BMS1P16 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for BMS1P16 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for BMS1P16 Gene

Drugs & Compounds for BMS1P16 Gene

No Compound Related Data Available

Transcripts for BMS1P16 Gene

mRNA/cDNA for BMS1P16 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BMS1P16 Gene

No ASD Table

Relevant External Links for BMS1P16 Gene

GeneLoc Exon Structure for
BMS1P16

Expression for BMS1P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BMS1P16 Gene

mRNA differential expression in normal tissues according to GTEx for BMS1P16 Gene

This gene is overexpressed in Testis (x4.7).
genes like me logo Genes that share expression patterns with BMS1P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BMS1P16 Gene

Orthologs for BMS1P16 Gene

Evolution for BMS1P16 Gene

ENSEMBL:
Gene Tree for BMS1P16 (if available)
TreeFam:
Gene Tree for BMS1P16 (if available)

No data available for Orthologs for BMS1P16 Gene

Paralogs for BMS1P16 Gene

No data available for Paralogs for BMS1P16 Gene

Variants for BMS1P16 Gene

Additional Variant Information for BMS1P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BMS1P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BMS1P16 Gene

Disorders for BMS1P16 Gene

No disorders were found for BMS1P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BMS1P16 Gene

Publications for BMS1P16 Gene

  1. Human paralogs of KIAA0187 were created through independent pericentromeric-directed and chromosome-specific duplication mechanisms. (PMID: 11779832) Crosier M … Jackson MS (Genome research 2002) 3 54

No data available for Mastermind for BMS1P16 Gene

Products for BMS1P16 Gene

Sources for BMS1P16 Gene