Aliases for BMS1P1 Gene

Aliases for BMS1P1 Gene

  • BMS1 Pseudogene 1 2 3 5
  • BMS1, Ribosome Biogenesis Factor Pseudogene 5 2 3
  • BMS1, Ribosome Biogenesis Factor Pseudogene 1 2 3
  • BMS1L Pseudogene 1 2 3
  • BMS1L Pseudogene 5 2 3
  • BMS1 Pseudogene 5 2
  • BMS1LP1 3
  • BMS1LP5 3
  • BMS1P5 3
  • BMS1P1 5

External Ids for BMS1P1 Gene

Previous HGNC Symbols for BMS1P1 Gene

  • BMS1LP1
  • BMS1P5
  • BMS1LP5

Previous GeneCards Identifiers for BMS1P1 Gene

  • GC10M046160
  • GC10M046732
  • GC10M043574

Summaries for BMS1P1 Gene

GeneCards Summary for BMS1P1 Gene

BMS1P1 (BMS1 Pseudogene 1) is a Pseudogene.

Additional gene information for BMS1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for BMS1P1 Gene

Genomics for BMS1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for BMS1P1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BMS1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for BMS1P1 Gene

Genomic Locations for BMS1P1 Gene
chr10:46,786,674-46,811,989
(GRCh38/hg38)
Size:
25,316 bases
Orientation:
Plus strand
chr10:46,737,612-46,762,892
(GRCh37/hg19)
Size:
25,281 bases
Orientation:
Minus strand

Genomic View for BMS1P1 Gene

Genes around BMS1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BMS1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BMS1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BMS1P1 Gene

Proteins for BMS1P1 Gene

Post-translational modifications for BMS1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BMS1P1 Gene

Domains & Families for BMS1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for BMS1P1 Gene

Function for BMS1P1 Gene

Phenotypes for BMS1P1 Gene

genes like me logo Genes that share phenotypes with BMS1P1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BMS1P1 Gene

Localization for BMS1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BMS1P1 Gene

Pathways & Interactions for BMS1P1 Gene

PathCards logo

SuperPathways for BMS1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for BMS1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for BMS1P1 Gene

Drugs & Compounds for BMS1P1 Gene

No Compound Related Data Available

Transcripts for BMS1P1 Gene

mRNA/cDNA for BMS1P1 Gene

1 REFSEQ mRNAs :
8 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BMS1P1 Gene

No ASD Table

Relevant External Links for BMS1P1 Gene

GeneLoc Exon Structure for
BMS1P1

Expression for BMS1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BMS1P1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for BMS1P1

genes like me logo Genes that share expression patterns with BMS1P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BMS1P1 Gene

Orthologs for BMS1P1 Gene

Evolution for BMS1P1 Gene

ENSEMBL:
Gene Tree for BMS1P1 (if available)
TreeFam:
Gene Tree for BMS1P1 (if available)

No data available for Orthologs for BMS1P1 Gene

Paralogs for BMS1P1 Gene

No data available for Paralogs for BMS1P1 Gene

Variants for BMS1P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for BMS1P1 Gene

Variant ID Type Subtype PubMed ID
dgv1120n54 CNV loss 21841781
dgv448n106 CNV deletion 24896259
dgv734n100 CNV gain 25217958
dgv737n100 CNV loss 25217958
dgv738n100 CNV loss 25217958
dgv739n100 CNV gain 25217958
dgv740n100 CNV gain+loss 25217958
dgv742n100 CNV loss 25217958
dgv743n100 CNV gain 25217958
esv2736152 CNV deletion 23290073
esv3578801 CNV loss 25503493
esv3584617 CNV loss 24956385
nsv1042820 CNV gain+loss 25217958
nsv1068692 CNV deletion 25765185
nsv1121807 CNV deletion 24896259
nsv1126251 CNV deletion 24896259
nsv1143634 CNV deletion 24896259
nsv1143636 CNV deletion 24896259
nsv550719 CNV loss 21841781
nsv550802 CNV loss 21841781
nsv821253 CNV deletion 20802225
nsv831850 CNV gain+loss 17160897
nsv947922 CNV duplication 23825009
nsv947960 CNV duplication 23825009
nsv951571 CNV deletion 24416366
nsv975690 CNV duplication 23825009
nsv975691 CNV duplication 23825009

Additional Variant Information for BMS1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BMS1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for BMS1P1 Gene

Disorders for BMS1P1 Gene

Additional Disease Information for BMS1P1

No disorders were found for BMS1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BMS1P1 Gene

Publications for BMS1P1 Gene

  1. Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing. (PMID: 28611215) Fei T … Brown M (Proceedings of the National Academy of Sciences of the United States of America 2017) 3
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3
  5. Human paralogs of KIAA0187 were created through independent pericentromeric-directed and chromosome-specific duplication mechanisms. (PMID: 11779832) Crosier M … Jackson MS (Genome research 2002) 3

Products for BMS1P1 Gene

Sources for BMS1P1 Gene