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Aliases for BMPR1B-AS1 Gene

Subcategory (RNA class) for BMPR1B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BMPR1B-AS1 Gene

  • BMPR1B Antisense RNA 1 (Head To Head) 2 3 5
  • TCONS_00007797 3

External Ids for BMPR1B-AS1 Gene

Summaries for BMPR1B-AS1 Gene

GeneCards Summary for BMPR1B-AS1 Gene

BMPR1B-AS1 (BMPR1B Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for BMPR1B-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BMPR1B-AS1 Gene

Genomics for BMPR1B-AS1 Gene

GeneHancer (GH) Regulatory Elements for BMPR1B-AS1 Gene

Promoters and enhancers for BMPR1B-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I094757 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 550.8 -0.7 -683 1.6 KLF17 ZNF76 SIN3A BMI1 ZNF2 ZNF335 GLIS2 ZNF366 EGR2 SP3 BMPR1B BMPR1B-AS1 GC04P094745 GC04M094777
GH04I094640 Enhancer 0.8 Ensembl ENCODE 10.5 +115.7 115691 2.3 JUN MAFG SP1 ZNF316 JUND NFE2 FOSL2 NFE2L2 SP7 PDLIM5 BMPR1B BMPR1B-AS1 ENSG00000249951 PIR44106
GH04I095079 Enhancer 0.2 dbSUPER 10.6 -323.2 -323220 2.5 BMPR1B BMPR1B-AS1 GC04M095163 GC04P094910
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BMPR1B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BMPR1B-AS1 Gene

Genomic Locations for BMPR1B-AS1 Gene
chr4:94,743,668-94,757,533
(GRCh38/hg38)
Size:
13,866 bases
Orientation:
Minus strand
chr4:95,664,827-95,678,684
(GRCh37/hg19)

Genomic View for BMPR1B-AS1 Gene

Genes around BMPR1B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BMPR1B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BMPR1B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BMPR1B-AS1 Gene

Proteins for BMPR1B-AS1 Gene

Post-translational modifications for BMPR1B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BMPR1B-AS1 Gene

Domains & Families for BMPR1B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BMPR1B-AS1 Gene

Function for BMPR1B-AS1 Gene

Phenotypes From GWAS Catalog for BMPR1B-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BMPR1B-AS1 Gene

Localization for BMPR1B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BMPR1B-AS1 Gene

Pathways & Interactions for BMPR1B-AS1 Gene

SuperPathways for BMPR1B-AS1 Gene

No Data Available

Interacting Proteins for BMPR1B-AS1 Gene

Gene Ontology (GO) - Biological Process for BMPR1B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BMPR1B-AS1 Gene

Drugs & Compounds for BMPR1B-AS1 Gene

No Compound Related Data Available

Transcripts for BMPR1B-AS1 Gene

mRNA/cDNA for BMPR1B-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BMPR1B-AS1 Gene

No ASD Table

Relevant External Links for BMPR1B-AS1 Gene

GeneLoc Exon Structure for
BMPR1B-AS1
ECgene alternative splicing isoforms for
BMPR1B-AS1

Expression for BMPR1B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BMPR1B-AS1 Gene

genes like me logo Genes that share expression patterns with BMPR1B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BMPR1B-AS1 Gene

Orthologs for BMPR1B-AS1 Gene

Evolution for BMPR1B-AS1 Gene

ENSEMBL:
Gene Tree for BMPR1B-AS1 (if available)
TreeFam:
Gene Tree for BMPR1B-AS1 (if available)

No data available for Orthologs for BMPR1B-AS1 Gene

Paralogs for BMPR1B-AS1 Gene

No data available for Paralogs for BMPR1B-AS1 Gene

Variants for BMPR1B-AS1 Gene

Sequence variations from dbSNP and Humsavar for BMPR1B-AS1 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000006632 -- 94,757,387(-) C/G intron_variant
rs1000079798 -- 94,758,120(-) G/A upstream_transcript_variant
rs1000491847 -- 94,743,808(-) G/C non_coding_transcript_variant
rs1000496996 -- 94,752,591(-) T/C intron_variant
rs1000618344 -- 94,759,184(-) C/A upstream_transcript_variant

Additional Variant Information for BMPR1B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BMPR1B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BMPR1B-AS1 Gene

Disorders for BMPR1B-AS1 Gene

Additional Disease Information for BMPR1B-AS1

No disorders were found for BMPR1B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BMPR1B-AS1 Gene

Publications for BMPR1B-AS1 Gene

No publications were found for BMPR1B-AS1 Gene.

Products for BMPR1B-AS1 Gene

Sources for BMPR1B-AS1 Gene

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