Aliases for BMI1 Gene
Aliases for BMI1 Gene
- BMI1 Proto-Oncogene, Polycomb Ring Finger 2 3 5
- Polycomb Group RING Finger Protein 4 3 4
- PCGF4 3 4
- RNF51 3 4
- B Lymphoma Mo-MLV Insertion Region 1 Homolog (Mouse) 2
- Murine Leukemia Viral (Bmi-1) Oncogene Homolog 3
- B Lymphoma Mo-MLV Insertion Region 1 Homolog 3
- BMI1 Polycomb Ring Finger Proto-Oncogene 3
- BMI1 Polycomb Ring Finger Oncogene 3
External Ids for BMI1 Gene
- HGNC: 1066
- Entrez Gene: 648
- Ensembl: ENSG00000168283
- OMIM: 164831
- UniProtKB: P35226
Previous HGNC Symbols for BMI1 Gene
- PCGF4
Previous GeneCards Identifiers for BMI1 Gene
- GC10U990006
- GC10P022760
- GC10P022614
- GC10P022650
- GC10P022605
- GC10P022611
Summaries for BMI1 Gene
-
This gene encodes a ring finger protein that is major component of the polycomb group complex 1 (PRC1). This complex functions through chromatin remodeling as an essential epigenetic repressor of multiple regulatory genes involved in embryonic development and self-renewal in somatic stem cells. This protein also plays a central role in DNA damage repair. This gene is an oncogene and aberrant expression is associated with numerous cancers and is associated with resistance to certain chemotherapies. A pseudogene of this gene is found on chromosome X. Read-through transcription also exists between this gene and the upstream COMM domain containing 3 (COMMD3) gene. [provided by RefSeq, Sep 2015]
GeneCards Summary for BMI1 Gene
BMI1 (BMI1 Proto-Oncogene, Polycomb Ring Finger) is a Protein Coding gene. Diseases associated with BMI1 include Mantle Cell Lymphoma and Retinal Microaneurysm. Among its related pathways are SUMOylation and Metabolism of proteins. Gene Ontology (GO) annotations related to this gene include sequence-specific DNA binding and ubiquitin-protein transferase activity. An important paralog of this gene is COMMD3-BMI1.
UniProtKB/Swiss-Prot for BMI1 Gene
-
Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A Lys-119, rendering chromatin heritably changed in its expressibility (PubMed:15386022, PubMed:16359901, PubMed:26151332, PubMed:16714294, PubMed:21772249, PubMed:25355358, PubMed:27827373). The complex composed of RNF2, UB2D3 and BMI1 binds nucleosomes, and has activity only with nucleosomal histone H2A (PubMed:21772249, PubMed:25355358). In the PRC1-like complex, regulates the E3 ubiquitin-protein ligase activity of RNF2/RING2 (PubMed:15386022, PubMed:26151332, PubMed:21772249).
Additional gene information for BMI1 Gene
- Monarch Initiative
- Search for BMI1 at DataMed
- Search for BMI1 at HumanCyc
No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BMI1 Gene
Genomics for BMI1 Gene
GeneHancer (GH) Regulatory Elements for BMI1 Gene
Promoters and enhancers for BMI1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around BMI1 on UCSC Golden Path with GeneCards custom track
- Top Transcription factor binding sites by QIAGEN in the BMI1 gene promoter:
Regulatory Element Products
Genomic Locations for BMI1 Gene
Genomic Locations for BMI1 Gene
- chr10:22,321,210-22,331,485
- (GRCh38/hg38)
- Size:
- 10,276 bases
- Orientation:
- Plus strand
- chr10:22,610,139-22,620,414
- (GRCh37/hg19)
Genomic View for BMI1 Gene
Genes around BMI1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10p12.2 by Ensembl
- 10p12.2 by Entrez Gene
- 10p12.2 by HGNC
BMI1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for BMI1 Gene
Proteins for BMI1 Gene
-
Protein details for BMI1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- P35226-BMI1_HUMAN
- Recommended name:
- Polycomb complex protein BMI-1
- Protein Accession:
- P35226
- Q16030
- Q5T8Z3
- Q96F37
Protein attributes for BMI1 Gene
- Size:
- 326 amino acids
- Molecular mass:
- 36949 Da
- Quaternary structure:
-
- Component of a PRC1-like complex (PubMed:12167701, PubMed:15386022, PubMed:19636380, PubMed:21282530, PubMed:26151332, PubMed:21772249, PubMed:25355358). Identified in a PRC1-like HPRC-H complex with CBX2, CBX4, CBX8, PHC1, PHC2, PHC3 RING1 and RNF2 (PubMed:12167701). Interacts with RNF2/RING2 (PubMed:16714294, PubMed:21772249, PubMed:25355358). Interacts with RING1 (By similarity). Part of a complex that contains RNF2, UB2D3 and BMI1, where RNF2 and BMI1 form a tight heterodimer, and UB2D3 interacts only with RNF2 (PubMed:21772249, PubMed:25355358). The complex composed of RNF2, UB2D3 and BMI1 binds nucleosomes, and has activity only with nucleosomal histone H2A (PubMed:21772249, PubMed:25355358). Interacts with CBX7 and CBX8 (PubMed:19636380). Interacts with SPOP (PubMed:15897469). Part of a complex consisting of BMI1, CUL3 and SPOP (PubMed:15897469). Interacts with E4F1 (PubMed:16882984). Interacts with PHC2 (PubMed:9121482, PubMed:9199346, PubMed:27827373).
- Miscellaneous:
-
- The hPRC-H complex purification reported by PubMed:12167701 probably presents a mixture of different PRC1-like complexes.
Protein Expression for BMI1 Gene
Post-translational modifications for BMI1 Gene
- Monoubiquitinated (By similarity). May be polyubiquitinated; which does not lead to proteasomal degradation.
Other Protein References for BMI1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- R&D Systems Antibodies for BMI1 (BMI-1)
- Cell Signaling Technology (CST) Antibodies for BMI1 (BMI1)
-
Custom Antibody ServicesOriGene Antibodies for BMI1
- Novus Biologicals Antibodies for BMI1
-
Abcam antibodies for BMI1
-
Cloud-Clone Corp. Antibodies for BMI1
- Invitrogen Antibodies for BMI1
- antibodies-online: Search results for 307 available BMI1 Antibodies ranked by validation data
- Compare Top BMI1 Antibodies
-
Recommended
- 1 IHC (p) Antibody (anti-rat)
- 1 IHC Antibody (anti-rat)
- 53 WB Antibodies (anti-rat)
- 1 IHC (p) Antibody (anti-mouse)
- 1 IHC Antibody (anti-mouse)
- 2 IF Antibodies (anti-mouse)
- 2 ChIP Antibodies (anti-mouse)
- 115 WB Antibodies (anti-mouse)
- 2 IHC Antibodies (anti-human)
- 2 DB Antibodies (anti-human)
- 2 ChIP Antibodies (anti-human)
- 3 IHC (p) Antibodies (anti-human)
- 3 IF Antibodies (anti-human)
- 17 FACS Antibodies (anti-human)
- 243 WB Antibodies (anti-human)
- GeneTex BMI1 antibody for BMI1
-
Custom Antibody ServicesProSci Antibodies for BMI1
-
Santa Cruz Biotechnology (SCBT) Antibodies for BMI1
- Sino Biological Antibodies for BMI1
Protein Products
-
OriGene Purified Proteins for BMI1
- Search Origene for MassSpec and Protein Over-expression Lysates for BMI1
- Origene Custom Protein Services for BMI1
-
Cloud-Clone Corp. Proteins for BMI1
- Search GeneTex for Proteins for BMI1
-
Abcam proteins for BMI1
Assay Products
- Cell Signaling Technology (CST) Sandwich ELISA Kits for BMI1 (BMI1)
-
Cloud-Clone Corp. Assay Kits for BMI1
No data available for DME Specific Peptides for BMI1 Gene
Domains & Families for BMI1 Gene
Gene Families for BMI1 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Cancer-related genes
- Predicted intracellular proteins
Protein Domains for BMI1 Gene
- InterPro:
- Blocks:
- ProtoNet:
Suggested Antigen Peptide Sequences for BMI1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
No data available for UniProtKB/Swiss-Prot for BMI1 Gene
Function for BMI1 Gene
Molecular function for BMI1 Gene
- GENATLAS Biochemistry:
- bmi-1 protooncogene homolog,activated by Moloney murine leukemia proviral insertion in Emu-myc transgenic mouse,polycomb group (PcG) complexing with SSX1 and SSX2 and associating with chromatin
- UniProtKB/Swiss-Prot Function:
- Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A Lys-119, rendering chromatin heritably changed in its expressibility (PubMed:15386022, PubMed:16359901, PubMed:26151332, PubMed:16714294, PubMed:21772249, PubMed:25355358, PubMed:27827373). The complex composed of RNF2, UB2D3 and BMI1 binds nucleosomes, and has activity only with nucleosomal histone H2A (PubMed:21772249, PubMed:25355358). In the PRC1-like complex, regulates the E3 ubiquitin-protein ligase activity of RNF2/RING2 (PubMed:15386022, PubMed:26151332, PubMed:21772249).
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005515 | protein binding | IPI | 15386022 |
| GO:0008270 | zinc ion binding | IDA | 16714294 |
| GO:0046872 | metal ion binding | IEA | -- |
| GO:0071535 | RING-like zinc finger domain binding | IPI | 16714294 |
| GO:1990841 | promoter-specific chromatin binding | IDA | 24623306 |
Phenotypes for BMI1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for BMI1
-
-
ViGene Biosciences lentiviral particle packaged cDNA for BMI1 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for BMI1 gene
- Search ViGene Biosciences for BMI1
CRISPR Products
-
OriGene CRISPR knockouts for BMI1
- genomics-online: gRNA clones - Search results for 109 available BMI1 gene related products
- Overview of 109 available BMI1 gene related products
- Applied Biological Materials CRISPR for BMI1
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for BMI1
- GenScript: Design CRISPR guide RNA sequences for BMI1
miRNA for BMI1 Gene
- miRTarBase miRNAs that target BMI1
-
- hsa-mir-200c-3p (MIRT000197)
- hsa-mir-16-5p (MIRT000266)
- hsa-mir-15a-5p (MIRT000280)
- hsa-mir-128-3p (MIRT004645)
- hsa-mir-302b-3p (MIRT005670)
- hsa-mir-203a-3p (MIRT006036)
- hsa-mir-708-5p (MIRT006139)
- hsa-mir-200b-3p (MIRT006165)
- hsa-mir-194-5p (MIRT007000)
- hsa-mir-218-5p (MIRT007258)
- hsa-let-7g-5p (MIRT024120)
- hsa-mir-33a-5p (MIRT028182)
- hsa-mir-106b-3p (MIRT038596)
- hsa-mir-27a-3p (MIRT050022)
- hsa-mir-544a (MIRT053511)
- hsa-mir-494-3p (MIRT053512)
- hsa-mir-495-3p (MIRT053513)
- hsa-mir-300 (MIRT053514)
- hsa-mir-30e-5p (MIRT053588)
- hsa-mir-302a-3p (MIRT053776)
- hsa-mir-183-5p (MIRT054143)
- hsa-mir-379-3p (MIRT177206)
- hsa-mir-380-3p (MIRT177207)
- hsa-mir-411-3p (MIRT177208)
- hsa-mir-4495 (MIRT177212)
- hsa-mir-559 (MIRT177226)
- hsa-mir-548b-5p (MIRT177228)
- hsa-mir-548a-5p (MIRT177229)
- hsa-mir-548c-5p (MIRT177230)
- hsa-mir-548d-5p (MIRT177231)
- hsa-mir-548j-5p (MIRT177232)
- hsa-mir-548n (MIRT177235)
- hsa-mir-548h-5p (MIRT177236)
- hsa-mir-548i (MIRT177237)
- hsa-mir-548w (MIRT177238)
- hsa-mir-548y (MIRT177239)
- hsa-mir-548o-5p (MIRT177240)
- hsa-mir-548ab (MIRT177241)
- hsa-mir-548ad-5p (MIRT177243)
- hsa-mir-548ae-5p (MIRT177244)
- hsa-mir-548ak (MIRT177245)
- hsa-mir-548am-5p (MIRT177246)
- hsa-mir-548ap-5p (MIRT177249)
- hsa-mir-548aq-5p (MIRT177250)
- hsa-mir-548ar-5p (MIRT177251)
- hsa-mir-548as-5p (MIRT177252)
- hsa-mir-548au-5p (MIRT177253)
- hsa-mir-548ay-5p (MIRT177256)
- hsa-mir-548bb-5p (MIRT177258)
- hsa-mir-580-5p (MIRT177295)
- hsa-mir-3120-3p (MIRT177298)
- hsa-mir-3942-5p (MIRT177299)
- hsa-mir-4703-5p (MIRT177300)
- hsa-mir-376c-3p (MIRT245244)
- hsa-mir-320a (MIRT262091)
- hsa-mir-586 (MIRT330296)
- hsa-mir-452-5p (MIRT437780)
- hsa-mir-487b-3p (MIRT437851)
- hsa-mir-548t-5p (MIRT560307)
- hsa-mir-548az-5p (MIRT560308)
- hsa-mir-153-5p (MIRT717182)
- hsa-mir-195-3p (MIRT717183)
- hsa-mir-16-2-3p (MIRT717184)
- hsa-mir-4666a-3p (MIRT717185)
- hsa-mir-338-5p (MIRT717186)
- hsa-mir-15a-3p (MIRT732884)
- hsa-mir-192-5p (MIRT732962)
- hsa-mir-21-5p (MIRT733326)
- hsa-mir-3622b-5p (MIRT733557)
- hsa-mir-200c-5p (MIRT734270)
- hsa-mir-128-1-5p (MIRT734515)
miRNA Products
- Search ViGene Biosciences for BMI1
Inhibitory RNA Products
- Origene RNAi, sirna, and shrna products in human, mouse, rat for BMI1
- Browse OriGene Inhibitory RNA Products For BMI1
- genomics-online: shRNA clones - Search results for 109 available BMI1 gene related products
- Overview of 109 available BMI1 gene related products
-
ViGene Biosciences ready-to-package AAV shRNAs for BMI1 gene
Clone Products
- Sino Biological Human cDNA Clone for BMI1
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for BMI1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for BMI1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Addgene plasmids for BMI1
- Applied Biological Materials Clones for BMI1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for BMI1
-
ViGene Biosciences adenoviral particle packaged cDNA for BMI1 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for BMI1 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for BMI1 gene
No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for BMI1 Gene
Localization for BMI1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for BMI1 Gene
- Nucleus. Cytoplasm.
| Compartment | Confidence |
|---|---|
| nucleus | 5 |
| cytosol | 5 |
| cytoskeleton | 2 |
| plasma membrane | 1 |
| extracellular | 1 |
| mitochondrion | 1 |
- Cytosol (2)
- Nuclear bodies (2)
- Nucleoli (2)
- Nucleus (2)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0000151 | ubiquitin ligase complex | IDA | 16714294 |
| GO:0005634 | nucleus | IDA,IEA | 9367786 |
| GO:0005654 | nucleoplasm | TAS | -- |
| GO:0005737 | cytoplasm | IEA | -- |
| GO:0005829 | cytosol | IDA | -- |
Pathways & Interactions for BMI1 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Cellular Senescence (REACTOME) | ||
| 2 | SUMOylation |
.95
|
|
| 3 | Metabolism of proteins | ||
| 4 | MicroRNAs in cancer | ||
| 5 | Signaling pathways regulating pluripotency of stem cells | ||
Pathways by source for BMI1 Gene
1 GeneTex pathway for BMI1 Gene
1 Cell Signaling Technology pathway for BMI1 Gene
2 BioSystems pathways for BMI1 Gene
9 Reactome pathways for BMI1 Gene
3 KEGG pathways for BMI1 Gene
Interacting Proteins for BMI1 Gene
Selected Interacting proteins:
P35226-BMI1_HUMAN
ENSP00000365851
for BMI1 Gene via
MINT
STRING
UniProtKB
IID
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0000122 | negative regulation of transcription by RNA polymerase II | IMP | 19636380 |
| GO:0006351 | transcription, DNA-templated | IEA | -- |
| GO:0006355 | regulation of transcription, DNA-templated | IEA | -- |
| GO:0007379 | segment specification | TAS | 7715727 |
| GO:0010468 | regulation of gene expression | IMP | 17420273 |
Drugs & Compounds for BMI1 Gene
(2) ApexBio Compounds for BMI1 Gene
| Compound | Action | Cas Number |
|---|---|---|
| PTC-209 | Bmi-1 inhibitor,cell-permeable and small-molecule | 315704-66-6 |
| PTC209 HBr | BMI-1 inhibitor | 1217022-63-3 |
Transcripts for BMI1 Gene
mRNA/cDNA for BMI1 Gene
- (1) REFSEQ mRNAs :
- (5) Additional mRNA sequences :
- (520) Selected AceView cDNA sequences:
- (10) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for BMI1 Gene
CRISPR Products
-
OriGene CRISPR knockouts for BMI1
- genomics-online: gRNA clones - Search results for 109 available BMI1 gene related products
- Overview of 109 available BMI1 gene related products
- Applied Biological Materials CRISPR for BMI1
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for BMI1
- GenScript: Design CRISPR guide RNA sequences for BMI1
miRNA Products
- Search ViGene Biosciences for BMI1
Inhibitory RNA Products
- Origene RNAi, sirna, and shrna products in human, mouse, rat for BMI1
- Browse OriGene Inhibitory RNA Products For BMI1
- genomics-online: shRNA clones - Search results for 109 available BMI1 gene related products
- Overview of 109 available BMI1 gene related products
-
ViGene Biosciences ready-to-package AAV shRNAs for BMI1 gene
Clone Products
- Sino Biological Human cDNA Clone for BMI1
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for BMI1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for BMI1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Addgene plasmids for BMI1
- Applied Biological Materials Clones for BMI1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4a | · | 4b | · | 4c | ^ | 5 | ^ | 6 | ^ | 7a | · | 7b | ^ | 8a | · | 8b | ^ | 9 | ^ | 10a | · | 10b | ^ | 11a | · | 11b | ^ | 12a | · | 12b | · | 12c | ^ | 13 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||
| SP2: | - | - | - | ||||||||||||||||||||||||||||||||||||||||
| SP3: | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||
| SP4: | - | - | |||||||||||||||||||||||||||||||||||||||||
| SP5: | - | - | |||||||||||||||||||||||||||||||||||||||||
| SP6: | - | - | |||||||||||||||||||||||||||||||||||||||||
| SP7: | - | - | - | ||||||||||||||||||||||||||||||||||||||||
| SP8: | - | ||||||||||||||||||||||||||||||||||||||||||
| SP9: | |||||||||||||||||||||||||||||||||||||||||||
| SP10: | - | - |
Expression for BMI1 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Eye (Sensory Organs)
- Limbal Basal Epithelial Cells Limbus Epithelium
-
Epithelial Cells
- Limbal Basal Epithelial Cells Limbus Epithelium
This gene is overexpressed in Plasma (28.0), Retina (9.1), and Blymphocyte (8.6).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for BMI1 Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of BMI1 Gene:
BMI1SOURCE GeneReport for Unigene cluster for BMI1 Gene:
Hs.380403Evidence on tissue expression from TISSUES for BMI1 Gene
- Blood(4.5)
- Muscle(4.4)
- Nervous system(3.5)
- Intestine(2.6)
- Lung(2.5)
- Bone marrow(2.4)
- Lymph node(2.4)
- Liver(2.3)
- Skin(2.3)
- Heart(2.2)
- Kidney(2.1)
Primer Products
-
OriGene qPCR primer pairs for BMI1
-
OriGene qPCR primer pairs and template standards for BMI1
- genomics-online: primer clones - Search results for 109 available BMI1 gene related products
- Overview of 109 available BMI1 gene related products
No data available for mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for BMI1 Gene
Orthologs for BMI1 Gene
This gene was present in the common ancestor of animals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | -- 34 |
|
OneToMany | |
| BMI1 33 |
|
||||
| cow (Bos Taurus) |
Mammalia | BMI1 34 |
|
OneToMany | |
| dog (Canis familiaris) |
Mammalia | BMI1 34 |
|
OneToMany | |
| mouse (Mus musculus) |
Mammalia | Bmi1 34 |
|
OneToMany | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | -- 34 |
|
OneToMany | |
| oppossum (Monodelphis domestica) |
Mammalia | -- 34 |
|
OneToMany | |
| chicken (Gallus gallus) |
Aves | BMI1 34 |
|
OneToMany | |
| lizard (Anolis carolinensis) |
Reptilia | -- 34 |
|
OneToMany | |
| zebrafish (Danio rerio) |
Actinopterygii | bmi1b 34 |
|
ManyToMany | |
| bmi1a 33 34 |
|
||||
| fruit fly (Drosophila melanogaster) |
Insecta | Psc 35 34 |
|
||
| Su(z)2 34 |
|
ManyToMany |
- Species where no ortholog for BMI1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for BMI1 Gene
(19) SIMAP similar genes for BMI1 Gene using alignment to 5 proteins:
Variants for BMI1 Gene
| SNP ID | Clin | Chr 10 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000104172 | -- | 22,331,976(+) | A/C/T | downstream_transcript_variant | |
| rs1000814650 | -- | 22,319,566(+) | T/A/C | upstream_transcript_variant | |
| rs1001065063 | -- | 22,326,251(+) | C/T | intron_variant | |
| rs1001221720 | -- | 22,323,605(+) | T/G | intron_variant | |
| rs1001531663 | -- | 22,321,631(+) | A/G | 5_prime_UTR_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| nsv951254 | CNV | duplication | 24416366 |
| nsv825300 | CNV | gain | 20364138 |
| nsv550207 | CNV | loss | 21841781 |
| nsv1143626 | CNV | deletion | 24896259 |
| nsv1069031 | CNV | deletion | 25765185 |
| esv27808 | CNV | gain | 19812545 |
| dgv137n67 | CNV | gain | 20364138 |
| dgv136n67 | CNV | gain | 20364138 |
| dgv1003n54 | CNV | loss | 21841781 |
| dgv1002n54 | CNV | loss | 21841781 |
Residual Variation Intolerance Score:
22% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for BMI1 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BMI1 Gene
Disorders for BMI1 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| mantle cell lymphoma |
|
|
| retinal microaneurysm |
|
|
| erythroplakia |
|
|
| brain cancer |
|
|
| night blindness, congenital stationary, type 1a |
|
|
Search BMI1 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for BMI1
No data available for UniProtKB/Swiss-Prot and Genatlas for BMI1 Gene
Publications for BMI1 Gene
- Identification and characterization of interactions between the vertebrate polycomb-group protein BMI1 and human homologs of polyhomeotic. (PMID: 9121482) Gunster MJ … Otte AP (Molecular and cellular biology 1997) 3 4 22 58
- Characterization and chromosomal localization of the human proto-oncogene BMI-1. (PMID: 8268912) Alkema MJ … van Lohuizen M (Human molecular genetics 1993) 2 3 4 58
- BMI1 regulates PRC1 architecture and activity through homo- and hetero-oligomerization. (PMID: 27827373) Gray F … Cierpicki T (Nature communications 2016) 3 4 58
- BMI1-RING1B is an autoinhibited RING E3 ubiquitin ligase. (PMID: 26151332) Taherbhoy AM … Cochran AG (Nature communications 2015) 3 4 58
- Crystal structure of the PRC1 ubiquitylation module bound to the nucleosome. (PMID: 25355358) McGinty RK … Tan S (Nature 2014) 3 4 58
Products for BMI1 Gene
- R&D Systems Antibodies for BMI1 (BMI-1)
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- Custom Antibody ServicesOriGene Antibodies for BMI1
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- Cell Signaling Technology (CST) Antibodies for BMI1 (BMI1)
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- Sino Biological Human cDNA Clone for BMI1
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- Browse Primary Antibodies
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- Cloud-Clone Corp. Antibodies for BMI1
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- Browse Knockouts at Cloud-Clone Corp.
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- Cloud-Clone Corp. disease models service
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- Cloud-Clone Corp. primary cells service
- Invitrogen Antibodies for BMI1
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- ApexBio compounds for BMI1
- Cyagen custom Knockout/knockin (KOKI) mouse models for BMI1
- VectorBuilder custom plasmid, inducible vectors for BMI1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for BMI1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Addgene plasmids for BMI1
- antibodies-online: Search results for 307 available BMI1 Antibodies ranked by validation data
- Compare Top BMI1 Antibodies
- Recommended
- 243 WB Antibodies (anti-human)
- 17 FACS Antibodies (anti-human)
- 3 IF Antibodies (anti-human)
- 3 IHC (p) Antibodies (anti-human)
- 2 ChIP Antibodies (anti-human)
- 2 DB Antibodies (anti-human)
- 2 IHC Antibodies (anti-human)
- 115 WB Antibodies (anti-mouse)
- 2 ChIP Antibodies (anti-mouse)
- 2 IF Antibodies (anti-mouse)
- 1 IHC Antibody (anti-mouse)
- 1 IHC (p) Antibody (anti-mouse)
- 53 WB Antibodies (anti-rat)
- 1 IHC Antibody (anti-rat)
- 1 IHC (p) Antibody (anti-rat)
- antibodies-online: Search results for 12 available BMI1 Elisa Kits ranked by validation data
- Compare Top BMI1 Elisa Kits
- antibodies-online: Search results for 13 available BMI1 Proteins ranked by validation data
- Compare Top BMI1 Proteins
- GeneTex BMI1 antibody for BMI1
- Search GeneTex for Proteins for BMI1
- ViGene Biosciences adenoviral particle packaged cDNA for BMI1 gene
- ViGene Biosciences lentiviral particle packaged cDNA for BMI1 gene
- ViGene Biosciences ready-to-package AAV shRNAs for BMI1 gene
- Search ViGene Biosciences for BMI1
- Santa Cruz Biotechnology (SCBT) Antibodies for BMI1
- Search Santa Cruz Biotechnology (SCBT) for BMI1 siRNA/shRNA
- Santa Cruz Biotechnology (SCBT) CRISPR for BMI1
- Custom Antibody ServicesProSci Antibodies for BMI1
- Search for BMI1 Proteins at ProSci
- Horizon Cell Lines for BMI1
- genomics-online: cdna clones - Search results for 109 available BMI1 gene related products
- Overview of 109 available BMI1 gene related products
- orf clones - Search results for 109 available BMI1 gene related products
- Overview of 109 available BMI1 gene related products
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- Overview of 109 available BMI1 gene related products
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- Overview of 109 available BMI1 gene related products
- genomics-online: shRNA clones - Search results for 109 available BMI1 gene related products
- Overview of 109 available BMI1 gene related products
Sources for BMI1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
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- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
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- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
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- (150) Human Protein Atlas
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- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew