Aliases for BIRC8 Gene

Aliases for BIRC8 Gene

  • Baculoviral IAP Repeat Containing 8 2 3 5
  • Inhibitor Of Apoptosis-Like Protein 2 2 3 4
  • IAP-Like Protein 2 2 3 4
  • ILP-2 2 3 4
  • Baculoviral IAP Repeat-Containing Protein 8 3 4
  • Testis-Specific Inhibitor Of Apoptosis 3 4
  • RNF136 2 3
  • HILP2 2 3
  • ILP2 3 4
  • Baculoviral IAP Repeat-Containing 8 2
  • BIRC8 5

External Ids for BIRC8 Gene

Previous GeneCards Identifiers for BIRC8 Gene

  • GC19M054438
  • GC19M054154
  • GC19M058468
  • GC19M058484
  • GC19M053792
  • GC19M050113

Summaries for BIRC8 Gene

GeneCards Summary for BIRC8 Gene

BIRC8 (Baculoviral IAP Repeat Containing 8) is a Pseudogene. Among its related pathways are TNFR1 Pathway and Apoptosis Modulation and Signaling. Gene Ontology (GO) annotations related to this gene include ubiquitin-protein transferase activity and scaffold protein binding.

UniProtKB/Swiss-Prot Summary for BIRC8 Gene

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for BIRC8 Gene

Genomics for BIRC8 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for BIRC8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J053037 Promoter/Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 10.4 +254.0 254033 1.6 ZBTB33 POLR2A ZBTB40 GABPB1 NR2C1 ZNF702P ENSG00000269082 ZNF347 ZNF160 ZNF677 VN1R2 BIRC8 ERVV-2 ERVV-1 RF00017-2767
GH19J053016 Enhancer 0.3 ENCODE 10.6 +274.4 274411 0.2 PRDM10 CEBPB RF00017-2767 RF00017-2768 lnc-ZNF160-1 ZNF160 BIRC8 ZNF415 ZNF347 ZNF677 VN1R2 ERVV-1
GH19J053019 Enhancer 0.3 ENCODE 10.6 +271.5 271531 0.1 CTCF RAD21 ZNF160 BIRC8 ZNF415 ZNF347 ZNF677 VN1R2 RF00017-2767 RF00017-2768 ERVV-1 ZNF702P
GH19J053787 Promoter/Enhancer 1 FANTOM5 Ensembl 2.8 -496.6 -496567 2 TBP DIDO1 NRF1 TAF7 ZBTB40 L3MBTL2 CREM GABPB1 TRIM24 POLR2A ENSG00000269564 ENSG00000269877 MIR371A MIR371B MIR372 MIR373 RNU6-1041P MIR1283-2 MIR516A2 MIR516A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BIRC8 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for BIRC8

Top Transcription factor binding sites by QIAGEN in the BIRC8 gene promoter:
  • Evi-1
  • FOXD1
  • FOXI1
  • HFH-3
  • Nkx3-1
  • Nkx3-1 v1
  • Nkx3-1 v2
  • Nkx3-1 v3
  • Nkx3-1 v4
  • Spz1

Genomic Locations for BIRC8 Gene

Latest Assembly
chr19:53,289,601-53,291,434
(GRCh38/hg38)
Size:
1,834 bases
Orientation:
Minus strand

Previous Assembly
chr19:53,792,854-53,794,687
(GRCh37/hg19 by Entrez Gene)
Size:
1,834 bases
Orientation:
Minus strand

chr19:53,792,856-53,794,875
(GRCh37/hg19 by Ensembl)
Size:
2,020 bases
Orientation:
Minus strand

Genomic View for BIRC8 Gene

Genes around BIRC8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BIRC8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BIRC8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BIRC8 Gene

Proteins for BIRC8 Gene

  • Protein details for BIRC8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96P09-BIRC8_HUMAN
    Recommended name:
    Baculoviral IAP repeat-containing protein 8
    Protein Accession:
    Q96P09
    Secondary Accessions:
    • Q6IPY1
    • Q96RW5

    Protein attributes for BIRC8 Gene

    Size:
    236 amino acids
    Molecular mass:
    27089 Da
    Quaternary structure:
    • Binds to caspase-9.

    Three dimensional structures from OCA and Proteopedia for BIRC8 Gene

neXtProt entry for BIRC8 Gene

Post-translational modifications for BIRC8 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for BIRC8 Gene

Domains & Families for BIRC8 Gene

Gene Families for BIRC8 Gene

HGNC:
Human Protein Atlas (HPA):
  • Plasma proteins
  • Predicted intracellular proteins

Protein Domains for BIRC8 Gene

InterPro:
Blocks:
  • Zn-finger, RING
  • Baculovirus inhibitor of apoptosis protein repeat (BIR)

Suggested Antigen Peptide Sequences for BIRC8 Gene

GenScript: Design optimal peptide antigens:
  • Testis-specific inhibitor of apoptosis (BIRC8_HUMAN)
  • Baculoviral IAP repeat-containing 8 (Q6PIA0_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q96P09

UniProtKB/Swiss-Prot:

BIRC8_HUMAN :
  • Belongs to the IAP family.
Family:
  • Belongs to the IAP family.
genes like me logo Genes that share domains with BIRC8: view

Function for BIRC8 Gene

Molecular function for BIRC8 Gene

UniProtKB/Swiss-Prot Function:
Protects against apoptosis mediated by BAX.

Gene Ontology (GO) - Molecular Function for BIRC8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0043027 cysteine-type endopeptidase inhibitor activity involved in apoptotic process IBA 21873635
GO:0046872 metal ion binding IEA --
GO:0061630 ubiquitin protein ligase activity IBA 21873635
genes like me logo Genes that share ontologies with BIRC8: view
genes like me logo Genes that share phenotypes with BIRC8: view

Animal Models for research

CRISPR products for research

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for BIRC8

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BIRC8 Gene

Localization for BIRC8 Gene

Subcellular locations from UniProtKB/Swiss-Prot for BIRC8 Gene

Cytoplasm.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for BIRC8 gene
Compartment Confidence
nucleus 4
cytoskeleton 3
mitochondrion 2
cytosol 2
plasma membrane 1
extracellular 1
endoplasmic reticulum 1
endosome 1
lysosome 1

Gene Ontology (GO) - Cellular Components for BIRC8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA 21873635
GO:0005737 cytoplasm IBA 21873635
GO:0005876 spindle microtubule IBA 21873635
genes like me logo Genes that share ontologies with BIRC8: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for BIRC8 Gene

Pathways & Interactions for BIRC8 Gene

PathCards logo

SuperPathways for BIRC8 Gene

genes like me logo Genes that share pathways with BIRC8: view

Pathways by source for BIRC8 Gene

2 Sino Biological pathways for BIRC8 Gene
1 R&D Systems pathway for BIRC8 Gene

Interacting Proteins for BIRC8 Gene

Gene Ontology (GO) - Biological Process for BIRC8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006915 apoptotic process IEA --
GO:0016567 protein ubiquitination IEA --
GO:0031398 positive regulation of protein ubiquitination IBA 21873635
GO:0043066 negative regulation of apoptotic process IBA 21873635
GO:0051726 regulation of cell cycle IBA 21873635
genes like me logo Genes that share ontologies with BIRC8: view

No data available for SIGNOR curated interactions for BIRC8 Gene

Drugs & Compounds for BIRC8 Gene

No Compound Related Data Available

Transcripts for BIRC8 Gene

mRNA/cDNA for BIRC8 Gene

1 REFSEQ mRNAs :
6 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR products for research

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for BIRC8

Alternative Splicing Database (ASD) splice patterns (SP) for BIRC8 Gene

No ASD Table

Relevant External Links for BIRC8 Gene

GeneLoc Exon Structure for
BIRC8

Expression for BIRC8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BIRC8 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

  • Testis (Reproductive System)

mRNA differential expression in normal tissues according to GTEx for BIRC8 Gene

This gene is overexpressed in Testis (x52.8).

Protein differential expression in normal tissues from HIPED for BIRC8 Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for BIRC8 Gene



Protein tissue co-expression partners for BIRC8 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for BIRC8

SOURCE GeneReport for Unigene cluster for BIRC8 Gene:

Hs.348263

mRNA Expression by UniProt/SwissProt for BIRC8 Gene:

Q96P09-BIRC8_HUMAN
Tissue specificity: Testis specific in normal tissues.

Evidence on tissue expression from TISSUES for BIRC8 Gene

  • Nervous system(4.4)
  • Kidney(2.2)
genes like me logo Genes that share expression patterns with BIRC8: view

Primer products for research

No data available for Phenotype-based relationships between genes and organs from Gene ORGANizer for BIRC8 Gene

Orthologs for BIRC8 Gene

This gene was present in the common ancestor of animals.

Orthologs for BIRC8 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia BIRC8 29
  • 98.59 (n)
Mouse
(Mus musculus)
Mammalia Xiap 30
  • 37 (a)
OneToMany
Cow
(Bos Taurus)
Mammalia XIAP 30
  • 36 (a)
OneToMany
Dog
(Canis familiaris)
Mammalia BIRC4 30
  • 36 (a)
OneToMany
Oppossum
(Monodelphis domestica)
Mammalia -- 30
  • 32 (a)
OneToMany
Platypus
(Ornithorhynchus anatinus)
Mammalia -- 30
  • 24 (a)
OneToMany
Chicken
(Gallus gallus)
Aves IAP3 30
  • 23 (a)
OneToMany
Lizard
(Anolis carolinensis)
Reptilia -- 30
  • 22 (a)
OneToMany
Zebrafish
(Danio rerio)
Actinopterygii xiap 30
  • 18 (a)
OneToMany
birc4 29
Fruit Fly
(Drosophila melanogaster)
Insecta Iap2 30
  • 16 (a)
ManyToMany
th 30
  • 15 (a)
ManyToMany
Sea Squirt
(Ciona savignyi)
Ascidiacea -- 30
  • 49 (a)
ManyToMany
-- 30
  • 43 (a)
ManyToMany
-- 30
  • 21 (a)
ManyToMany
-- 30
  • 20 (a)
ManyToMany
-- 30
  • 18 (a)
ManyToMany
-- 30
  • 11 (a)
ManyToMany
-- 30
  • 4 (a)
ManyToMany
-- 30
ManyToMany
Species where no ortholog for BIRC8 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for BIRC8 Gene

ENSEMBL:
Gene Tree for BIRC8 (if available)
TreeFam:
Gene Tree for BIRC8 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for BIRC8: view image
Alliance of Genome Resources:
Additional Orthologs for BIRC8

Paralogs for BIRC8 Gene

(2) SIMAP similar genes for BIRC8 Gene using alignment to 2 proteins:

  • BIRC8_HUMAN
  • Q6PIA0_HUMAN
genes like me logo Genes that share paralogs with BIRC8: view

No data available for Paralogs for BIRC8 Gene

Variants for BIRC8 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for BIRC8 Gene

SNP ID Clinical significance and condition Chr 19 pos Variation AA Info Type
rs34092035 -- p.Leu165Ser
rs34683072 -- p.Ala225Val
rs35700345 -- p.Ala225Thr
rs35880972 -- p.Ala156Thr
rs8109165 -- p.His196Tyr

Structural Variations from Database of Genomic Variants (DGV) for BIRC8 Gene

Variant ID Type Subtype PubMed ID
esv2718787 CNV deletion 23290073
esv2718812 CNV deletion 23290073
esv3644741 CNV gain 21293372
esv5629 OTHER inversion 19470904
esv6489 OTHER inversion 19470904
nsv1055773 CNV gain 25217958
nsv1078889 OTHER inversion 25765185
nsv1141887 OTHER inversion 24896259
nsv1153752 OTHER inversion 26484159
nsv817865 CNV gain 17921354

Variation tolerance for BIRC8 Gene

Residual Variation Intolerance Score: 92.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.85; 48.11% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for BIRC8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BIRC8
Leiden Open Variation Database (LOVD)
BIRC8

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for BIRC8 Gene

Disorders for BIRC8 Gene

Additional Disease Information for BIRC8

Human Genome Epidemiology Navigator
(HuGE)
Atlas
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform
Open Targets Platform

No disorders were found for BIRC8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BIRC8 Gene

Publications for BIRC8 Gene

  1. Molecular cloning of ILP-2, a novel member of the inhibitor of apoptosis protein family. (PMID: 11390657) Richter BW … Duckett CS (Molecular and cellular biology 2001) 2 3 4
  2. Investigation of genetic susceptibility factors for human longevity - a targeted nonsynonymous SNP study. (PMID: 20800603) Flachsbart F … Nebel A (Mutation research 2010) 3 40
  3. The BIR domain of IAP-like protein 2 is conformationally unstable: implications for caspase inhibition. (PMID: 15485395) Shin H … Salvesen GS (The Biochemical journal 2005) 3 4
  4. Genomic organization of the X-linked inhibitor of apoptosis and identification of a novel testis-specific transcript. (PMID: 11597143) Lagacé M … Korneluk RG (Genomics 2001) 3 4
  5. A reference map of the human binary protein interactome. (PMID: 32296183) Luck K … Calderwood MA (Nature 2020) 3

Products for BIRC8 Gene

Sources for BIRC8 Gene