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Aliases for BIRC6-AS1 Gene

Subcategory (RNA class) for BIRC6-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BIRC6-AS1 Gene

  • BIRC6 Antisense RNA 1 2 3 5
  • BIRC6 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Pal3 3

External Ids for BIRC6-AS1 Gene

Previous GeneCards Identifiers for BIRC6-AS1 Gene

  • GC02M032603

Summaries for BIRC6-AS1 Gene

GeneCards Summary for BIRC6-AS1 Gene

BIRC6-AS1 (BIRC6 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for BIRC6-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BIRC6-AS1 Gene

Genomics for BIRC6-AS1 Gene

GeneHancer (GH) Regulatory Elements for BIRC6-AS1 Gene

Promoters and enhancers for BIRC6-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I032418 Enhancer 0.6 ENCODE 0.3 -39.3 -39293 1.3 JUND GATA3 RFX1 JUN IKZF1 CEBPB PRDM10 EP300 TTC27 SLC30A6 BIRC6-AS1 BIRC6 ENSG00000276334
GH02I032368 Enhancer 0.3 Ensembl 0.4 +11.4 11398 0.4 KDM1A BIRC6 BIRC6-AS1 GC02M032356
GH02I032421 Enhancer 0.4 Ensembl 0.3 -41.7 -41702 0.2 ZNF512 NR2C1 MLLT1 BIRC6-AS1 BIRC6 ENSG00000276334
GH02I032425 Enhancer 0.6 Ensembl ENCODE 0.2 -46.5 -46480 1.6 POLR2A PRDM1 BIRC6 MIR558 TTC27 BIRC6-AS1 ENSG00000276334
GH02I032484 Enhancer 0.9 Ensembl ENCODE 0.1 -105.7 -105713 1.8 ATF1 JUN MAX CEBPG FOSL1 CTBP1 FOSL2 FOS CEBPB MNT TTC27 ENSG00000276334 BIRC6-AS1 BIRC6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BIRC6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BIRC6-AS1 Gene

Genomic Locations for BIRC6-AS1 Gene
chr2:32,377,631-32,379,599
(GRCh38/hg38)
Size:
1,969 bases
Orientation:
Minus strand
chr2:32,602,699-32,604,667
(GRCh37/hg19)

Genomic View for BIRC6-AS1 Gene

Genes around BIRC6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BIRC6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BIRC6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for BIRC6-AS1 Gene

Proteins for BIRC6-AS1 Gene

Post-translational modifications for BIRC6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BIRC6-AS1 Gene

Domains & Families for BIRC6-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BIRC6-AS1 Gene

Function for BIRC6-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BIRC6-AS1 Gene

Localization for BIRC6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BIRC6-AS1 Gene

Pathways & Interactions for BIRC6-AS1 Gene

SuperPathways for BIRC6-AS1 Gene

No Data Available

Interacting Proteins for BIRC6-AS1 Gene

Gene Ontology (GO) - Biological Process for BIRC6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BIRC6-AS1 Gene

Drugs & Compounds for BIRC6-AS1 Gene

No Compound Related Data Available

Transcripts for BIRC6-AS1 Gene

mRNA/cDNA for BIRC6-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BIRC6-AS1 Gene

No ASD Table

Relevant External Links for BIRC6-AS1 Gene

GeneLoc Exon Structure for
BIRC6-AS1
ECgene alternative splicing isoforms for
BIRC6-AS1

Expression for BIRC6-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BIRC6-AS1 Gene

genes like me logo Genes that share expression patterns with BIRC6-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BIRC6-AS1 Gene

Orthologs for BIRC6-AS1 Gene

Evolution for BIRC6-AS1 Gene

ENSEMBL:
Gene Tree for BIRC6-AS1 (if available)
TreeFam:
Gene Tree for BIRC6-AS1 (if available)

No data available for Orthologs for BIRC6-AS1 Gene

Paralogs for BIRC6-AS1 Gene

No data available for Paralogs for BIRC6-AS1 Gene

Variants for BIRC6-AS1 Gene

Additional Variant Information for BIRC6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BIRC6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BIRC6-AS1 Gene

Disorders for BIRC6-AS1 Gene

No disorders were found for BIRC6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BIRC6-AS1 Gene

Publications for BIRC6-AS1 Gene

  1. Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution. (PMID: 22196729) Ulitsky I … Bartel DP (Cell 2011) 2 3 58

Products for BIRC6-AS1 Gene

Sources for BIRC6-AS1 Gene

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