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Aliases for BIK Gene

Aliases for BIK Gene

  • BCL2 Interacting Killer 2 3 5
  • BCL2-Interacting Killer (Apoptosis-Inducing) 2 3
  • Apoptosis Inducer NBK 3 4
  • Natural Born Killer 2 3
  • BIP1 3 4
  • BP4 3 4
  • NBK 3 4
  • Bcl-2-Interacting Killer 3
  • Apoptosis-Inducing NBK 3

External Ids for BIK Gene

Previous GeneCards Identifiers for BIK Gene

  • GC22P040109
  • GC22P041737
  • GC22P041831
  • GC22P043506
  • GC22P026465

Summaries for BIK Gene

Entrez Gene Summary for BIK Gene

  • The protein encoded by this gene shares a critical BH3 domain with other death-promoting proteins, such as BID, BAK, BAD and BAX, that is required for its pro-apoptotic activity, and for interaction with anti-apoptotic members of the BCL2 family, and viral survival-promoting proteins. Since the activity of this protein is suppressed in the presence of survival-promoting proteins, it is suggested as a likely target for anti-apoptotic proteins. [provided by RefSeq, Sep 2011]

GeneCards Summary for BIK Gene

BIK (BCL2 Interacting Killer) is a Protein Coding gene. Diseases associated with BIK include Apple Allergy. Among its related pathways are Apoptosis and survival_Regulation of Apoptosis by Mitochondrial Proteins and Apoptosis and Autophagy. Gene Ontology (GO) annotations related to this gene include protein heterodimerization activity and BH domain binding.

UniProtKB/Swiss-Prot for BIK Gene

  • Accelerates programmed cell death. Association to the apoptosis repressors Bcl-X(L), BHRF1, Bcl-2 or its adenovirus homolog E1B 19k protein suppresses this death-promoting activity. Does not interact with BAX.

Gene Wiki entry for BIK Gene

Additional gene information for BIK Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BIK Gene

Genomics for BIK Gene

GeneHancer (GH) Regulatory Elements for BIK Gene

Promoters and enhancers for BIK Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J043110 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 664.2 +0.6 562 1.7 FOXA2 SIN3A RAD21 ZNF335 GLIS2 SCRT2 SP3 SP1 KLF16 GLIS1 BIK POLDIP3 RN7SKP80 RPL5P34 MCAT RRP7A ARFGAP3 TCF20
GH22J043142 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 9.1 +32.6 32567 1.8 HDGF PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 YY1 E2F8 ZNF207 MCAT RRP7BP POLDIP3 RN7SKP80 LOC100506679 TTLL1 BIK TSPO TTLL12
GH22J043103 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 8.9 -6.3 -6306 1.6 PKNOX1 CLOCK ATF1 FOXA2 MLX ARNT ARID4B FOS ATF7 NFKBIZ MCAT TSPO CYB5R3 ARFGAP3 BIK CYP2D7 GC22M043099
GH22J043125 Enhancer 1.3 Ensembl ENCODE dbSUPER 10 +17.3 17257 4.5 ARID4B GLI4 ETS1 YY1 GLIS2 KLF7 ZNF548 RUNX3 SP3 RXRA RN7SKP80 RPL5P34 POLDIP3 RPS25P10 BIK MCAT TTLL12
GH22J043066 Enhancer 1.1 Ensembl ENCODE 11.5 -43.2 -43219 1.4 HDAC1 PKNOX1 FOXA2 KLF17 ZNF2 ZEB1 GTF3C2 ZNF121 GLIS2 EGR1 TTLL1 RPS25P10 RN7SKP80 POLDIP3 BIK ENSG00000273366 A4GALT MCAT RPL5P34 ENSG00000233903
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BIK on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the BIK gene promoter:
  • STAT5B
  • AML1a
  • RFX1
  • Pax-4a
  • FOXL1
  • GATA-6
  • AP-4
  • GATA-1
  • HSF2

Genomic Locations for BIK Gene

Genomic Locations for BIK Gene
chr22:43,110,748-43,129,712
(GRCh38/hg38)
Size:
18,965 bases
Orientation:
Plus strand
chr22:43,506,754-43,525,718
(GRCh37/hg19)
Size:
18,965 bases
Orientation:
Plus strand

Genomic View for BIK Gene

Genes around BIK on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BIK Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BIK Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BIK Gene

Proteins for BIK Gene

  • Protein details for BIK Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q13323-BIK_HUMAN
    Recommended name:
    Bcl-2-interacting killer
    Protein Accession:
    Q13323
    Secondary Accessions:
    • Q16582
    • Q6FH93

    Protein attributes for BIK Gene

    Size:
    160 amino acids
    Molecular mass:
    18016 Da
    Quaternary structure:
    • Interacts with RHBDL4/RHBDD1.

    Three dimensional structures from OCA and Proteopedia for BIK Gene

neXtProt entry for BIK Gene

Post-translational modifications for BIK Gene

  • Proteolytically cleaved by RHBDL4/RHBDD1. RHBDL4/RHBDD1-induced cleavage is a necessary step prior its degradation by the proteosome-dependent mechanism.
  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for BIK Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for BIK Gene

Domains & Families for BIK Gene

Gene Families for BIK Gene

Protein Domains for BIK Gene

Suggested Antigen Peptide Sequences for BIK Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q13323

UniProtKB/Swiss-Prot:

BIK_HUMAN :
  • Intact BH3 motif is required by BIK, BID, BAK, BAD and BAX for their pro-apoptotic activity and for their interaction with anti-apoptotic members of the Bcl-2 family.
Domain:
  • Intact BH3 motif is required by BIK, BID, BAK, BAD and BAX for their pro-apoptotic activity and for their interaction with anti-apoptotic members of the Bcl-2 family.
genes like me logo Genes that share domains with BIK: view

Function for BIK Gene

Molecular function for BIK Gene

UniProtKB/Swiss-Prot Function:
Accelerates programmed cell death. Association to the apoptosis repressors Bcl-X(L), BHRF1, Bcl-2 or its adenovirus homolog E1B 19k protein suppresses this death-promoting activity. Does not interact with BAX.
GENATLAS Biochemistry:
BCL2-interacting killer (apoptosis-inducing)

Phenotypes From GWAS Catalog for BIK Gene

Gene Ontology (GO) - Molecular Function for BIK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 9027312
genes like me logo Genes that share ontologies with BIK: view
genes like me logo Genes that share phenotypes with BIK: view

Animal Models for BIK Gene

MGI Knock Outs for BIK:
  • Bik Bik<tm1Ast>

Animal Model Products

Clone Products

  • Addgene plasmids for BIK

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for BIK Gene

Localization for BIK Gene

Subcellular locations from UniProtKB/Swiss-Prot for BIK Gene

Endomembrane system; Single-pass membrane protein. Mitochondrion membrane; Single-pass membrane protein. Note=Around the nuclear envelope, and in cytoplasmic membranes.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for BIK gene
Compartment Confidence
mitochondrion 4
nucleus 2
endoplasmic reticulum 2
cytosol 2
plasma membrane 1
peroxisome 1
golgi apparatus 1

Gene Ontology (GO) - Cellular Components for BIK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IEA --
GO:0012505 endomembrane system IEA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
GO:0031966 mitochondrial membrane IEA --
genes like me logo Genes that share ontologies with BIK: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for BIK Gene

Pathways & Interactions for BIK Gene

genes like me logo Genes that share pathways with BIK: view

Pathways by source for BIK Gene

1 PharmGKB pathway for BIK Gene
1 KEGG pathway for BIK Gene
1 GeneGo (Thomson Reuters) pathway for BIK Gene
1 Qiagen pathway for BIK Gene
1 Cell Signaling Technology pathway for BIK Gene

SIGNOR curated interactions for BIK Gene

Inactivates:
Is activated by:
Is inactivated by:

Gene Ontology (GO) - Biological Process for BIK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006915 apoptotic process TAS 10381623
GO:0008584 male gonad development IBA --
GO:0008637 apoptotic mitochondrial changes IBA --
GO:0032464 positive regulation of protein homooligomerization IDA 21041309
GO:0042981 regulation of apoptotic process IEA --
genes like me logo Genes that share ontologies with BIK: view

Drugs & Compounds for BIK Gene

(5) Drugs for BIK Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Bortezomib (PS-341) Pharma Proteasome Inhibitor 0

(1) Additional Compounds for BIK Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with BIK: view

Transcripts for BIK Gene

mRNA/cDNA for BIK Gene

(1) REFSEQ mRNAs :
(7) Additional mRNA sequences :
(47) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BIK Gene

BCL2-interacting killer (apoptosis-inducing):
Representative Sequences:

Clone Products

  • Addgene plasmids for BIK

Alternative Splicing Database (ASD) splice patterns (SP) for BIK Gene

No ASD Table

Relevant External Links for BIK Gene

GeneLoc Exon Structure for
BIK
ECgene alternative splicing isoforms for
BIK

Expression for BIK Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BIK Gene

mRNA differential expression in normal tissues according to GTEx for BIK Gene

This gene is overexpressed in Minor Salivary Gland (x7.7), Colon - Transverse (x5.2), Esophagus - Mucosa (x4.5), and Prostate (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of BIK Gene:

BIK

SOURCE GeneReport for Unigene cluster for BIK Gene:

Hs.475055
genes like me logo Genes that share expression patterns with BIK: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BIK Gene

Orthologs for BIK Gene

This gene was present in the common ancestor of mammals.

Orthologs for BIK Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia BIK 34 33
  • 98.75 (n)
OneToOne
rat
(Rattus norvegicus)
Mammalia Bik 33
  • 65.61 (n)
mouse
(Mus musculus)
Mammalia Bik 16 34 33
  • 62.4 (n)
dog
(Canis familiaris)
Mammalia BIK 34
  • 45 (a)
OneToOne
Species where no ortholog for BIK was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for BIK Gene

ENSEMBL:
Gene Tree for BIK (if available)
TreeFam:
Gene Tree for BIK (if available)
Aminode:
Evolutionary constrained regions (ECRs) for BIK: view image

Paralogs for BIK Gene

No data available for Paralogs for BIK Gene

Variants for BIK Gene

Sequence variations from dbSNP and Humsavar for BIK Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000009171 -- 43,119,847(+) A/G intron_variant
rs1000221934 -- 43,125,354(+) C/A intron_variant
rs1000266240 -- 43,126,398(+) G/C intron_variant
rs1000312350 -- 43,114,744(+) C/T intron_variant
rs1000573929 -- 43,125,492(+) G/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for BIK Gene

Variant ID Type Subtype PubMed ID
esv2762124 CNV gain 21179565
esv33816 CNV gain 17666407
esv3647853 CNV loss 21293372
esv3647854 CNV loss 21293372
nsv1061240 CNV gain 25217958
nsv459889 CNV gain 19166990
nsv589085 CNV gain 21841781
nsv589086 CNV loss 21841781
nsv834214 CNV gain 17160897

Variation tolerance for BIK Gene

Residual Variation Intolerance Score: 72.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.45; 28.35% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for BIK Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BIK

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BIK Gene

Disorders for BIK Gene

MalaCards: The human disease database

(1) MalaCards diseases for BIK Gene - From: DISEASES

Disorder Aliases PubMed IDs
apple allergy
  • malus domestica fruit allergy
- elite association - COSMIC cancer census association via MalaCards
Search BIK in MalaCards View complete list of genes associated with diseases

Additional Disease Information for BIK

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
genes like me logo Genes that share disorders with BIK: view

No data available for UniProtKB/Swiss-Prot and Genatlas for BIK Gene

Publications for BIK Gene

  1. Bik, a novel death-inducing protein shares a distinct sequence motif with Bcl-2 family proteins and interacts with viral and cellular survival-promoting proteins. (PMID: 7478623) Boyd JM … Lutz RJ (Oncogene 1995) 2 3 4 22 58
  2. A novel member of the Rhomboid family, RHBDD1, regulates BIK-mediated apoptosis. (PMID: 18953687) Wang Y … Wang L (Cellular and molecular life sciences : CMLS 2008) 3 4 22 58
  3. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I … O'Brien KP (Nature 1999) 2 3 4 58
  4. Induction of apoptosis by human Nbk/Bik, a BH3-containing protein that interacts with E1B 19K. (PMID: 8816500) Han J … White E (Molecular and cellular biology 1996) 3 4 22 58
  5. Genome-wide association study identifies new prostate cancer susceptibility loci. (PMID: 21743057) Schumacher FR … Kraft P (Human molecular genetics 2011) 3 44 58

Products for BIK Gene

Sources for BIK Gene

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