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Aliases for BEND3P1 Gene

Aliases for BEND3P1 Gene

  • BEN Domain Containing 3 Pseudogene 1 2 3 5

External Ids for BEND3P1 Gene

Previous GeneCards Identifiers for BEND3P1 Gene

  • GC10P052417

Summaries for BEND3P1 Gene

GeneCards Summary for BEND3P1 Gene

BEND3P1 (BEN Domain Containing 3 Pseudogene 1) is a Pseudogene.

Additional gene information for BEND3P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BEND3P1 Gene

Genomics for BEND3P1 Gene

GeneHancer (GH) Regulatory Elements for BEND3P1 Gene

Promoters and enhancers for BEND3P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J050653 Enhancer 0.7 ENCODE 606.8 -2.0 -1999 1.9 CTCF RAD21 IKZF1 ZNF512 REST ZNF316 ZNF766 FOXK2 FOXA2 MAFG BEND3P1 SGMS1-AS1 SHQ1P1 SGMS1
GH10J050618 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 24.2 -33.6 -33581 8.4 SP1 CC2D1A ZFX ELF3 MNT CBFA2T2 ZNF148 NKRF POLR2A MLLT1 SGMS1 GC10P050623 GC10P050620 AGAP6 LINC00843 BEND3P1 WASHC2A PARG RNA5SP317 SGMS1-AS1
GH10J050602 Enhancer 1.2 ENCODE dbSUPER 47.4 -50.3 -50326 6.8 MLLT1 CEBPG ZSCAN21 MAFK TRIM24 SP7 SP5 PRDM1 ZNF384 SMARCA4 BEND3P1 SGMS1-AS1 ASAH2 RNU7-107P SGMS1 GC10P050620
GH10J050659 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 21.7 +3.8 3834 1.6 CC2D1A ELF3 NKRF GTF2F1 ZNF687 CDC5L TRIM24 POLR2A MLLT1 RAD21 PIR61306 PIR41880 SGMS1 BEND3P1 ASAH2B SGMS1-AS1
GH10J050990 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.5 +336.4 336415 4.8 ZSCAN21 SP7 PRDM1 GLIS2 PKNOX1 ZBTB8A ZNF600 PRDM10 ZIC2 ZSCAN4 PRKG1 BEND3P1 LOC102724719
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BEND3P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BEND3P1 Gene

Genomic Locations for BEND3P1 Gene
chr10:50,655,967-50,663,946
(GRCh38/hg38)
Size:
7,980 bases
Orientation:
Plus strand
chr10:52,415,727-52,423,706
(GRCh37/hg19)
Size:
7,980 bases
Orientation:
Plus strand

Genomic View for BEND3P1 Gene

Genes around BEND3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BEND3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BEND3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BEND3P1 Gene

Proteins for BEND3P1 Gene

Post-translational modifications for BEND3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BEND3P1 Gene

Domains & Families for BEND3P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BEND3P1 Gene

Function for BEND3P1 Gene

Phenotypes From GWAS Catalog for BEND3P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BEND3P1 Gene

Localization for BEND3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BEND3P1 Gene

Pathways & Interactions for BEND3P1 Gene

PathCards logo

SuperPathways for BEND3P1 Gene

No Data Available

Interacting Proteins for BEND3P1 Gene

Gene Ontology (GO) - Biological Process for BEND3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BEND3P1 Gene

Drugs & Compounds for BEND3P1 Gene

No Compound Related Data Available

Transcripts for BEND3P1 Gene

mRNA/cDNA for BEND3P1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BEND3P1 Gene

No ASD Table

Relevant External Links for BEND3P1 Gene

GeneLoc Exon Structure for
BEND3P1
ECgene alternative splicing isoforms for
BEND3P1

Expression for BEND3P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BEND3P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of BEND3P1 Gene:

BEND3P1
genes like me logo Genes that share expression patterns with BEND3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BEND3P1 Gene

Orthologs for BEND3P1 Gene

Evolution for BEND3P1 Gene

ENSEMBL:
Gene Tree for BEND3P1 (if available)
TreeFam:
Gene Tree for BEND3P1 (if available)

No data available for Orthologs for BEND3P1 Gene

Paralogs for BEND3P1 Gene

No data available for Paralogs for BEND3P1 Gene

Variants for BEND3P1 Gene

Additional Variant Information for BEND3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BEND3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BEND3P1 Gene

Disorders for BEND3P1 Gene

No disorders were found for BEND3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BEND3P1 Gene

Publications for BEND3P1 Gene

No publications were found for BEND3P1 Gene.

No data available for External Links for BEND3P1 Gene

Products for BEND3P1 Gene

Sources for BEND3P1 Gene

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