Aliases for BDP1P Gene

Aliases for BDP1P Gene

  • B Double Prime 1 Pseudogene 2 3 5
  • B Double Prime 1, Subunit Of RNA Polymerase III Transcription Initiation Factor IIIB Pseudogene 3
  • BDP1P 5

External Ids for BDP1P Gene

Previous GeneCards Identifiers for BDP1P Gene

  • GC18U900409
  • GC18M073274
  • GC18M075144
  • GC18M077433
  • GC18M077434
  • GC18M077444
  • GC18M077445
  • GC18M077443
  • GC18M077442
  • GC18M077435
  • GC18M077436
  • GC18M077438
  • GC18M077439
  • GC18M077440

Summaries for BDP1P Gene

GeneCards Summary for BDP1P Gene

BDP1P (B Double Prime 1 Pseudogene) is a Pseudogene.

Additional gene information for BDP1P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for BDP1P Gene

Genomics for BDP1P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for BDP1P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J077437 Enhancer 0.2 FANTOM5 600.7 0.0 -6 0.3 BDP1P lnc-MBP-8 ENSG00000264015 LOC107985172 GALR1
GH18J077432 Enhancer 0.2 Ensembl 0.7 +4.0 4047 1.2 ENSG00000199392 ZNF236 BDP1P lnc-MBP-8 ENSG00000264015 GALR1
GH18J077447 Enhancer 0.2 Ensembl 0.4 -10.9 -10853 0.6 BDP1P ENSG00000264015 LOC107985172 GALR1
GH18J077457 Enhancer 0.2 Ensembl 0.4 -21.2 -21153 0.4 BDP1P ENSG00000264015 LOC107985172 GALR1
GH18J077461 Enhancer 0.2 Ensembl 0.4 -24.3 -24253 0.6 BDP1P ENSG00000264015 LOC107985172 GALR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BDP1P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for BDP1P Gene

Genomic Locations for BDP1P Gene
chr18:77,432,057-77,437,248
(GRCh38/hg38)
Size:
5,192 bases
Orientation:
Minus strand
chr18:75,144,013-75,149,205
(GRCh37/hg19)
Size:
5,193 bases
Orientation:
Minus strand

Genomic View for BDP1P Gene

Genes around BDP1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BDP1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BDP1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BDP1P Gene

Proteins for BDP1P Gene

No data available for DME Specific Peptides for BDP1P Gene

Domains & Families for BDP1P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for BDP1P Gene

Function for BDP1P Gene

Phenotypes From GWAS Catalog for BDP1P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BDP1P Gene

Localization for BDP1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BDP1P Gene

Pathways & Interactions for BDP1P Gene

PathCards logo

SuperPathways for BDP1P Gene

No Data Available

Gene Ontology (GO) - Biological Process for BDP1P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for BDP1P Gene

Drugs & Compounds for BDP1P Gene

No Compound Related Data Available

Transcripts for BDP1P Gene

mRNA/cDNA for BDP1P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for BDP1P Gene

No ASD Table

Relevant External Links for BDP1P Gene

GeneLoc Exon Structure for
BDP1P

Expression for BDP1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BDP1P Gene

genes like me logo Genes that share expression patterns with BDP1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BDP1P Gene

Orthologs for BDP1P Gene

Evolution for BDP1P Gene

ENSEMBL:
Gene Tree for BDP1P (if available)
TreeFam:
Gene Tree for BDP1P (if available)

No data available for Orthologs for BDP1P Gene

Paralogs for BDP1P Gene

No data available for Paralogs for BDP1P Gene

Variants for BDP1P Gene

Additional Variant Information for BDP1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BDP1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BDP1P Gene

Disorders for BDP1P Gene

Additional Disease Information for BDP1P

Genetic Association Database
(GAD)

No disorders were found for BDP1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BDP1P Gene

Publications for BDP1P Gene

  1. A genome-wide association study of inflammatory biomarker changes in response to fenofibrate treatment in the Genetics of Lipid Lowering Drug and Diet Network. (PMID: 22228203) Aslibekyan S … Arnett DK (Pharmacogenetics and genomics 2012) 41
  2. Genome-wide association study of rheumatoid arthritis in the Spanish population: KLF12 as a risk locus for rheumatoid arthritis susceptibility. (PMID: 18668548) Julià A … Marsal S (Arthritis and rheumatism 2008) 41
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41

Products for BDP1P Gene

Sources for BDP1P Gene