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BDP1P Gene(Pseudogene)

B Double Prime 1 Pseudogene

GCID:
GC18M077442
GIFtS:
8
Genes Participants
UDN Logo

Aliases for BDP1P Gene

Aliases for BDP1P Gene

  • B Double Prime 1 Pseudogene 2 3 5
  • B Double Prime 1, Subunit Of RNA Polymerase III Transcription Initiation Factor IIIB Pseudogene 3

External Ids for BDP1P Gene

Previous GeneCards Identifiers for BDP1P Gene

  • GC18U900409
  • GC18M073274
  • GC18M075144
  • GC18M077433
  • GC18M077434
  • GC18M077435
  • GC18M077436
  • GC18M077438
  • GC18M077439
  • GC18M077440
  • GC18M077441

Summaries for BDP1P Gene

GeneCards Summary for BDP1P Gene

BDP1P (B Double Prime 1 Pseudogene) is a Pseudogene.

Additional gene information for BDP1P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BDP1P Gene

Genomics for BDP1P Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for BDP1P Gene

Promoters and enhancers for BDP1P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH18J077437 Enhancer 0.2 FANTOM5 650.7 0.0 -5 0.3 GC18M077443 BDP1P ENSG00000264015 GC18M077573
GH18J077487 Enhancer 0.2 FANTOM5 0.2 -50.0 -49950 0.1 BDP1P ENSG00000264015 GC18M077573
GH18J077499 Enhancer 0.2 FANTOM5 0.2 -62.8 -62775 0.1 BDP1P GC18M077573 ENSG00000264015
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BDP1P on UCSC Golden Path with GeneCards custom track

Genomic Locations for BDP1P Gene

Genomic Locations for BDP1P Gene
chr18:77,432,057-77,437,249
(GRCh38/hg38)
Size:
5,193 bases
Orientation:
Minus strand
chr18:75,144,013-75,149,205
(GRCh37/hg19)
Size:
5,193 bases
Orientation:
Minus strand

Genomic View for BDP1P Gene

Genes around BDP1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BDP1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BDP1P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for BDP1P Gene

Proteins for BDP1P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for BDP1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for BDP1P Gene

Domains & Families for BDP1P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BDP1P Gene

Function for BDP1P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for BDP1P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BDP1P Gene

Localization for BDP1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BDP1P Gene

Pathways & Interactions for BDP1P Gene

SuperPathways for BDP1P Gene

PathCards logo More details on SuperPathways for BDP1P
No Data Available

Interacting Proteins for BDP1P Gene

Gene Ontology (GO) - Biological Process for BDP1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BDP1P Gene

Drugs & Compounds for BDP1P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for BDP1P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for BDP1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BDP1P Gene

No ASD Table

Relevant External Links for BDP1P Gene

GeneLoc Exon Structure for
BDP1P
ECgene alternative splicing isoforms for
BDP1P

Expression for BDP1P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BDP1P Gene

mRNA expression in normal human tissues for BDP1P Gene
mRNA expression by GTEx for BDP1P Gene

NURSA nuclear receptor signaling pathways regulating expression of BDP1P Gene:

BDP1P
genes like me logo Genes that share expression patterns with BDP1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BDP1P Gene

Orthologs for BDP1P Gene

Evolution for BDP1P Gene

ENSEMBL:
Gene Tree for BDP1P (if available)
TreeFam:
Gene Tree for BDP1P (if available)

No data available for Orthologs for BDP1P Gene

Paralogs for BDP1P Gene

No data available for Paralogs for BDP1P Gene

Variants for BDP1P Gene

Additional Variant Information for BDP1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BDP1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BDP1P Gene

Disorders for BDP1P Gene

Additional Disease Information for BDP1P

Genetic Association Database
(GAD)

No disorders were found for BDP1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BDP1P Gene

Publications for BDP1P Gene

  1. A genome-wide association study of inflammatory biomarker changes in response to fenofibrate treatment in the Genetics of Lipid Lowering Drug and Diet Network. (PMID: 22228203) Aslibekyan S … Arnett DK (Pharmacogenetics and genomics 2012) 44 58
  2. Genome-wide association study of rheumatoid arthritis in the Spanish population: KLF12 as a risk locus for rheumatoid arthritis susceptibility. (PMID: 18668548) Julià A … Marsal S (Arthritis and rheumatism 2008) 44 58
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 44 58

Products for BDP1P Gene

Sources for BDP1P Gene

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