Aliases for BCAR3-AS1 Gene

Data sources for BCAR3-AS1 Gene:

RNA type for BCAR3-AS1 Gene

lncRNA

Aliases for BCAR3-AS1 Gene

External Ids for BCAR3-AS1 Gene

Previous GeneCards Identifiers for BCAR3-AS1 Gene

  • GC01P093593

Summaries for BCAR3-AS1 Gene

GeneCards Summary for BCAR3-AS1 Gene

BCAR3-AS1 (BCAR3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for BCAR3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for BCAR3-AS1 Gene

Genomics for BCAR3-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for BCAR3-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BCAR3-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for BCAR3-AS1 Gene

Latest Assembly
chr1:93,560,679-93,617,629
(GRCh38/hg38)
Size:
56,951 bases
Orientation:
Plus strand

Previous Assembly
chr1:94,057,525-94,065,587
(GRCh37/hg19 by Entrez Gene)
Size:
8,063 bases
Orientation:
Plus strand

chr1:94,057,756-94,071,130
(GRCh37/hg19 by Ensembl)
Size:
13,375 bases
Orientation:
Plus strand

Genomic View for BCAR3-AS1 Gene

Genes around BCAR3-AS1 on UCSC Golden Path with GeneCards custom track
BCAR3-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
BCAR3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BCAR3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BCAR3-AS1 Gene

Proteins for BCAR3-AS1 Gene

Post-translational modifications for BCAR3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BCAR3-AS1 Gene

Domains & Families for BCAR3-AS1 Gene

Gene Families for BCAR3-AS1 Gene

genes like me logo Genes that share domains with BCAR3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for BCAR3-AS1 Gene

Function for BCAR3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BCAR3-AS1 Gene

Localization for BCAR3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BCAR3-AS1 Gene

Pathways & Interactions for BCAR3-AS1 Gene

PathCards logo

SuperPathways for BCAR3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for BCAR3-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for BCAR3-AS1 Gene

Drugs & Compounds for BCAR3-AS1 Gene

No Compound Related Data Available

Transcripts for BCAR3-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for BCAR3-AS1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00004F3455_9606 lncRNA 717 3

Ensembl: ENST00000446684 (view in UCSC) ,

LncBook: HSALNT0010786,

LNCipedia: lnc-FNBP1L-7:1,

URS0000759DCC_9606 lncRNA 1562 2

RefSeq: NR_034091,

NONCODE: NONHSAT004537.2,

URS0000439712_9606 lncRNA 722 2

Ensembl: ENST00000431770 (view in UCSC) ,

NONCODE: NONHSAT004538.2,

URS0000068549_9606 lncRNA 639 2

Ensembl: ENST00000427243 (view in UCSC) ,

NONCODE: NONHSAT004539.2,

URS00001963BD_9606 lncRNA 504 2

Ensembl: ENST00000417401 (view in UCSC) ,

NONCODE: NONHSAT004540.2,

BCAR3-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for BCAR3-AS1 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for BCAR3-AS1 Gene

No ASD Table

Relevant External Links for BCAR3-AS1 Gene

GeneLoc Exon Structure for
BCAR3-AS1

Expression for BCAR3-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for BCAR3-AS1

SOURCE GeneReport for Unigene cluster for BCAR3-AS1 Gene:

Hs.729244
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BCAR3-AS1 Gene

Orthologs for BCAR3-AS1 Gene

Evolution for BCAR3-AS1 Gene

ENSEMBL:
Gene Tree for BCAR3-AS1 (if available)
TreeFam:
Gene Tree for BCAR3-AS1 (if available)
Alliance of Genome Resources:
Additional Orthologs for BCAR3-AS1

No data available for Orthologs for BCAR3-AS1 Gene

Paralogs for BCAR3-AS1 Gene

No data available for Paralogs for BCAR3-AS1 Gene

Variants for BCAR3-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for BCAR3-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for BCAR3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BCAR3-AS1
Leiden Open Variation Database (LOVD)
BCAR3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BCAR3-AS1 Gene

Disorders for BCAR3-AS1 Gene

Additional Disease Information for BCAR3-AS1

Open Targets Platform
Open Targets Platform

No disorders were found for BCAR3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BCAR3-AS1 Gene

Publications for BCAR3-AS1 Gene

No publications were found for BCAR3-AS1 Gene.

No data available for Mastermind for BCAR3-AS1 Gene

Products for BCAR3-AS1 Gene

Sources for BCAR3-AS1 Gene