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Aliases for BANF1P3 Gene

Aliases for BANF1P3 Gene

  • Barrier To Autointegration Factor 1 Pseudogene 3 2 3 5

External Ids for BANF1P3 Gene

Previous GeneCards Identifiers for BANF1P3 Gene

  • GC02M231591

Summaries for BANF1P3 Gene

GeneCards Summary for BANF1P3 Gene

BANF1P3 (Barrier To Autointegration Factor 1 Pseudogene 3) is a Pseudogene.

Additional gene information for BANF1P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BANF1P3 Gene

Genomics for BANF1P3 Gene

GeneHancer (GH) Regulatory Elements for BANF1P3 Gene

Promoters and enhancers for BANF1P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J230723 Enhancer 0.2 ENCODE 650.7 +2.0 1973 0.6 BANF1P3 LINC01907 CAB39
GH02J230177 Enhancer 0.2 dbSUPER 5.3 +546.9 546927 1.9 SP110 BANF1P3 SP140 ENSG00000283451
GH02J230711 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 +11.7 11666 5.3 HDGF FOXA2 SMAD1 ARNT ARID4B SIN3A DMAP1 YBX1 ZNF2 IRF4 CAB39 RNU6-268P TRIP12 NCL PSMD1 DNER BANF1P3
GH02J230721 Enhancer 0.7 Ensembl ENCODE 0.7 +3.6 3575 1.4 NANOG ELF1 RUNX3 ETS1 CAB39 BANF1P3
GH02J230736 Enhancer 1.1 Ensembl ENCODE 0.4 -12.6 -12625 3.4 FOXA2 MLX ARID4B NEUROD1 TCF12 RUNX3 NFKBIZ SP5 PPARG NFIL3 CAB39 GC02P230753 BANF1P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BANF1P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BANF1P3 Gene

Genomic Locations for BANF1P3 Gene
chr2:230,724,752-230,725,479
(GRCh38/hg38)
Size:
728 bases
Orientation:
Minus strand
chr2:231,589,467-231,590,194
(GRCh37/hg19)
Size:
728 bases
Orientation:
Minus strand

Genomic View for BANF1P3 Gene

Genes around BANF1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BANF1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BANF1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BANF1P3 Gene

Function for BANF1P3 Gene

Phenotypes From GWAS Catalog for BANF1P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BANF1P3 Gene

Localization for BANF1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BANF1P3 Gene

Pathways & Interactions for BANF1P3 Gene

SuperPathways for BANF1P3 Gene

No Data Available

Interacting Proteins for BANF1P3 Gene

Gene Ontology (GO) - Biological Process for BANF1P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BANF1P3 Gene

Drugs & Compounds for BANF1P3 Gene

No Compound Related Data Available

Transcripts for BANF1P3 Gene

mRNA/cDNA for BANF1P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BANF1P3 Gene

No ASD Table

Relevant External Links for BANF1P3 Gene

GeneLoc Exon Structure for
BANF1P3
ECgene alternative splicing isoforms for
BANF1P3

Expression for BANF1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BANF1P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of BANF1P3 Gene:

BANF1P3
genes like me logo Genes that share expression patterns with BANF1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BANF1P3 Gene

Orthologs for BANF1P3 Gene

Evolution for BANF1P3 Gene

ENSEMBL:
Gene Tree for BANF1P3 (if available)
TreeFam:
Gene Tree for BANF1P3 (if available)

No data available for Orthologs for BANF1P3 Gene

Paralogs for BANF1P3 Gene

No data available for Paralogs for BANF1P3 Gene

Variants for BANF1P3 Gene

Additional Variant Information for BANF1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BANF1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BANF1P3 Gene

Disorders for BANF1P3 Gene

No disorders were found for BANF1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BANF1P3 Gene

Publications for BANF1P3 Gene

No publications were found for BANF1P3 Gene.

Products for BANF1P3 Gene

Sources for BANF1P3 Gene

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