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Aliases for BANF1P1 Gene

Aliases for BANF1P1 Gene

  • Barrier To Autointegration Factor 1 Pseudogene 1 2 3 5
  • Breakpoint Cluster Region Protein, Uterine Leiomyoma, 1 3
  • D14S1460E 3
  • D14S1460 3
  • BCRP1 3
  • BCRG1 3

External Ids for BANF1P1 Gene

Previous GeneCards Identifiers for BANF1P1 Gene

  • GC14U900176
  • GC14P069403

Summaries for BANF1P1 Gene

GeneCards Summary for BANF1P1 Gene

BANF1P1 (Barrier To Autointegration Factor 1 Pseudogene 1) is a Pseudogene. Diseases associated with BANF1P1 include Leiomyoma.

Additional gene information for BANF1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BANF1P1 Gene

Genomics for BANF1P1 Gene

GeneHancer (GH) Regulatory Elements for BANF1P1 Gene

Promoters and enhancers for BANF1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I068931 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.9 5854 22.8 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A YY1 ZNF143 FOS SP5 MXD4 ACTN1 ZFP36L1 DCAF5 GALNT16 GC14P068937 BANF1P1
GH14I068927 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.5 -7523 3.6 NFIA NFIB ZFP64 ZMYM3 YY1 ZFHX2 NFIC ZFP36 KDM1A ZBTB33 ACTN1 ZFP36L1 DCAF5 BANF1P1 GC14M068442
GH14I068923 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -11.5 -11527 2.5 NCOA3 CTCF PKNOX1 ESRRA FOXA2 SAP130 MAX ZNF2 RAD21 YY1 ACTN1 GC14M068442 BANF1P1
GH14I068922 Enhancer 0.7 ENCODE dbSUPER 0.4 -14.1 -14100 0.9 TAF1 POLR2A ZFP64 RCOR1 ZIC2 RAD21 CHD2 ACTN1 GC14M068442 BANF1P1
GH14I068921 Enhancer 0.6 ENCODE dbSUPER 0.4 -14.7 -14688 0.2 CTCF ZFP64 ACTN1 GC14M068442 BANF1P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BANF1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BANF1P1 Gene

Genomic Locations for BANF1P1 Gene
chr14:68,936,547-68,937,244
(GRCh38/hg38)
Size:
698 bases
Orientation:
Plus strand
chr14:69,403,264-69,403,961
(GRCh37/hg19)

Genomic View for BANF1P1 Gene

Genes around BANF1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BANF1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BANF1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BANF1P1 Gene

Proteins for BANF1P1 Gene

Post-translational modifications for BANF1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BANF1P1 Gene

Domains & Families for BANF1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BANF1P1 Gene

Function for BANF1P1 Gene

Phenotypes From GWAS Catalog for BANF1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BANF1P1 Gene

Localization for BANF1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BANF1P1 Gene

Pathways & Interactions for BANF1P1 Gene

SuperPathways for BANF1P1 Gene

No Data Available

Interacting Proteins for BANF1P1 Gene

Gene Ontology (GO) - Biological Process for BANF1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BANF1P1 Gene

Drugs & Compounds for BANF1P1 Gene

No Compound Related Data Available

Transcripts for BANF1P1 Gene

mRNA/cDNA for BANF1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BANF1P1 Gene

No ASD Table

Relevant External Links for BANF1P1 Gene

GeneLoc Exon Structure for
BANF1P1
ECgene alternative splicing isoforms for
BANF1P1

Expression for BANF1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BANF1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of BANF1P1 Gene:

BANF1P1
genes like me logo Genes that share expression patterns with BANF1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BANF1P1 Gene

Orthologs for BANF1P1 Gene

Evolution for BANF1P1 Gene

ENSEMBL:
Gene Tree for BANF1P1 (if available)
TreeFam:
Gene Tree for BANF1P1 (if available)

No data available for Orthologs for BANF1P1 Gene

Paralogs for BANF1P1 Gene

No data available for Paralogs for BANF1P1 Gene

Variants for BANF1P1 Gene

Additional Variant Information for BANF1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BANF1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BANF1P1 Gene

Disorders for BANF1P1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for BANF1P1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
leiomyoma
  • leiomyomatous neoplasm
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for BANF1P1

Genetic Association Database
(GAD)
genes like me logo Genes that share disorders with BANF1P1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for BANF1P1 Gene

Publications for BANF1P1 Gene

  1. Genomic and functional map of the chromosome 14 t(12;14) breakpoint cluster region in uterine leiomyoma. (PMID: 9740667) Lynch RA … Menon AG (Genomics 1998) 2 3 58
  2. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung HC … Singleton A (The Lancet. Neurology 2006) 44 58

Products for BANF1P1 Gene

Sources for BANF1P1 Gene

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