Free for academic non-profit institutions. Other users need a Commercial license

Aliases for BACH1-IT1 Gene

Subcategory (RNA class) for BACH1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for BACH1-IT1 Gene

  • BACH1 Intronic Transcript 1 2 5
  • BACH1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for BACH1-IT1 Gene

Previous GeneCards Identifiers for BACH1-IT1 Gene

  • GC00U933656
  • GC21P030727

Summaries for BACH1-IT1 Gene

GeneCards Summary for BACH1-IT1 Gene

BACH1-IT1 (BACH1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for BACH1-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BACH1-IT1 Gene

Genomics for BACH1-IT1 Gene

GeneHancer (GH) Regulatory Elements for BACH1-IT1 Gene

Promoters and enhancers for BACH1-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J029021 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.9 -327.4 -327410 4.7 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 IRF4 USP16 ENSG00000273254 CCT8 BACH1 RWDD2B N6AMT1 LTN1 RPL12P9 RPL23P2 BACH1-IT1
GH21J029346 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 -2.1 -2073 6.3 SMAD1 FOXA2 IRF4 POLR2B E2F8 ARID2 ZNF207 ZNF143 ATF7 RUNX3 RPL23P2 LTN1 ENSG00000224649 ENSG00000231125 USP16 BACH1-IT2 BACH1-AS1 RPL12P9 LINC00189 MAP3K7CL
GH21J029341 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -8.7 -8721 3.5 PKNOX1 ZSCAN4 BATF IRF4 SCRT2 FOS ETV6 BCLAF1 IKZF2 RUNX3 CCT8 LTN1 MAP3K7CL BACH1-IT1 GC21P029329 GC21P029330 BACH1 GRIK1-AS2
GH21J029334 Enhancer 0.8 ENCODE dbSUPER 0.4 -16.1 -16062 2 HDGF CTCF ARNT CEBPB MAX CEBPG ZNF184 HMBOX1 ZNF24 GC21P029329 GC21P029330 BACH1-IT1 BACH1 GRIK1-AS2
GH21J029332 Enhancer 0.7 ENCODE dbSUPER 0.4 -18.7 -18720 1.7 FOSL1 JUND ZFP91 FOS ZNF600 ZBTB33 ZNF24 GC21P029329 GC21P029330 BACH1-IT1 BACH1 GRIK1-AS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BACH1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BACH1-IT1 Gene

Genomic Locations for BACH1-IT1 Gene
chr21:29,351,634-29,361,894
(GRCh38/hg38)
Size:
10,261 bases
Orientation:
Plus strand
chr21:30,723,955-30,734,215
(GRCh37/hg19)

Genomic View for BACH1-IT1 Gene

Genes around BACH1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BACH1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BACH1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for BACH1-IT1 Gene

Proteins for BACH1-IT1 Gene

Post-translational modifications for BACH1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BACH1-IT1 Gene

Domains & Families for BACH1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BACH1-IT1 Gene

Function for BACH1-IT1 Gene

Phenotypes From GWAS Catalog for BACH1-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BACH1-IT1 Gene

Localization for BACH1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BACH1-IT1 Gene

Pathways & Interactions for BACH1-IT1 Gene

SuperPathways for BACH1-IT1 Gene

No Data Available

Interacting Proteins for BACH1-IT1 Gene

Gene Ontology (GO) - Biological Process for BACH1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BACH1-IT1 Gene

Drugs & Compounds for BACH1-IT1 Gene

No Compound Related Data Available

Transcripts for BACH1-IT1 Gene

mRNA/cDNA for BACH1-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BACH1-IT1 Gene

No ASD Table

Relevant External Links for BACH1-IT1 Gene

GeneLoc Exon Structure for
BACH1-IT1
ECgene alternative splicing isoforms for
BACH1-IT1

Expression for BACH1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BACH1-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for BACH1-IT1 Gene

This gene is overexpressed in Testis (x9.7) and Muscle - Skeletal (x5.3).
genes like me logo Genes that share expression patterns with BACH1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BACH1-IT1 Gene

Orthologs for BACH1-IT1 Gene

Evolution for BACH1-IT1 Gene

ENSEMBL:
Gene Tree for BACH1-IT1 (if available)
TreeFam:
Gene Tree for BACH1-IT1 (if available)

No data available for Orthologs for BACH1-IT1 Gene

Paralogs for BACH1-IT1 Gene

No data available for Paralogs for BACH1-IT1 Gene

Variants for BACH1-IT1 Gene

Additional Variant Information for BACH1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BACH1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BACH1-IT1 Gene

Disorders for BACH1-IT1 Gene

No disorders were found for BACH1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BACH1-IT1 Gene

Publications for BACH1-IT1 Gene

No publications were found for BACH1-IT1 Gene.

Products for BACH1-IT1 Gene

Sources for BACH1-IT1 Gene

Content
Loading form....