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Aliases for B3GALNT1P1 Gene

Aliases for B3GALNT1P1 Gene

  • Beta-1,3-N-Acetylgalactosaminyltransferase 1 Pseudogene 1 2 3 5

External Ids for B3GALNT1P1 Gene

Summaries for B3GALNT1P1 Gene

GeneCards Summary for B3GALNT1P1 Gene

B3GALNT1P1 (Beta-1,3-N-Acetylgalactosaminyltransferase 1 Pseudogene 1) is a Pseudogene.

Additional gene information for B3GALNT1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for B3GALNT1P1 Gene

Genomics for B3GALNT1P1 Gene

GeneHancer (GH) Regulatory Elements for B3GALNT1P1 Gene

Promoters and enhancers for B3GALNT1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I069597 Enhancer 0.4 Ensembl dbSUPER 550.8 +0.0 48 0.4 B3GALNT1P1 GC02P069577 ANXA4 AAK1
GH02I069600 Enhancer 1.1 Ensembl ENCODE 0.8 +3.9 3949 1.7 PKNOX1 ATF1 ARNT NCOA2 TCF12 GATA2 FOS ATF7 DEK NCOA1 B3GALNT1P1 GC02P069577 ANXA4 AAK1
GH02I069603 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +7.3 7277 2.7 HDGF MEIS2 PKNOX1 ATF1 TAF9B ZNF529 TEAD4 TAL1 E4F1 CHAMP1 GFPT1 B3GALNT1P1 GC02P069577 ANXA4 AAK1
GH02I069614 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +18.6 18585 2.8 PKNOX1 ESRRA JUN EBF1 ZNF644 CTBP1 NFATC1 FOS FOSL2 HOMEZ ANXA4 B3GALNT1P1 GC02P069577 AAK1
GH02I069624 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +28.0 27994 1.4 HDGF HDAC1 PKNOX1 TAF9B ARNT FEZF1 ZBTB40 CHAMP1 RBM34 ZNF366 TIA1 AAK1 GFPT1 ANXA4 B3GALNT1P1 GC02P069577
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around B3GALNT1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for B3GALNT1P1 Gene

Genomic Locations for B3GALNT1P1 Gene
chr2:69,597,353-69,599,151
(GRCh38/hg38)
Size:
1,799 bases
Orientation:
Plus strand
chr2:69,824,463-69,826,517
(GRCh37/hg19)

Genomic View for B3GALNT1P1 Gene

Genes around B3GALNT1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
B3GALNT1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for B3GALNT1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for B3GALNT1P1 Gene

Proteins for B3GALNT1P1 Gene

Post-translational modifications for B3GALNT1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for B3GALNT1P1 Gene

Domains & Families for B3GALNT1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for B3GALNT1P1 Gene

Function for B3GALNT1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for B3GALNT1P1 Gene

Localization for B3GALNT1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for B3GALNT1P1 Gene

Pathways & Interactions for B3GALNT1P1 Gene

SuperPathways for B3GALNT1P1 Gene

No Data Available

Interacting Proteins for B3GALNT1P1 Gene

Gene Ontology (GO) - Biological Process for B3GALNT1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for B3GALNT1P1 Gene

Drugs & Compounds for B3GALNT1P1 Gene

No Compound Related Data Available

Transcripts for B3GALNT1P1 Gene

mRNA/cDNA for B3GALNT1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for B3GALNT1P1 Gene

No ASD Table

Relevant External Links for B3GALNT1P1 Gene

GeneLoc Exon Structure for
B3GALNT1P1
ECgene alternative splicing isoforms for
B3GALNT1P1

Expression for B3GALNT1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for B3GALNT1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of B3GALNT1P1 Gene:

B3GALNT1P1
genes like me logo Genes that share expression patterns with B3GALNT1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for B3GALNT1P1 Gene

Orthologs for B3GALNT1P1 Gene

Evolution for B3GALNT1P1 Gene

ENSEMBL:
Gene Tree for B3GALNT1P1 (if available)
TreeFam:
Gene Tree for B3GALNT1P1 (if available)

No data available for Orthologs for B3GALNT1P1 Gene

Paralogs for B3GALNT1P1 Gene

No data available for Paralogs for B3GALNT1P1 Gene

Variants for B3GALNT1P1 Gene

Additional Variant Information for B3GALNT1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
B3GALNT1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for B3GALNT1P1 Gene

Disorders for B3GALNT1P1 Gene

No disorders were found for B3GALNT1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for B3GALNT1P1 Gene

Publications for B3GALNT1P1 Gene

No publications were found for B3GALNT1P1 Gene.

Products for B3GALNT1P1 Gene

Sources for B3GALNT1P1 Gene

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