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Aliases for AZGP1P1 Gene

Aliases for AZGP1P1 Gene

  • Alpha-2-Glycoprotein 1, Zinc-Binding Pseudogene 1 2 3 5
  • Alpha-2-Glycoprotein 1, Zinc Pseudogene 1 2

External Ids for AZGP1P1 Gene

Previous GeneCards Identifiers for AZGP1P1 Gene

  • GC00U990025
  • GC07U901495
  • GC07P099417
  • GC07P099579
  • GC07P094214
  • GC07P099588

Summaries for AZGP1P1 Gene

GeneCards Summary for AZGP1P1 Gene

AZGP1P1 (Alpha-2-Glycoprotein 1, Zinc-Binding Pseudogene 1) is a Pseudogene.

Additional gene information for AZGP1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AZGP1P1 Gene

Genomics for AZGP1P1 Gene

GeneHancer (GH) Regulatory Elements for AZGP1P1 Gene

Promoters and enhancers for AZGP1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I099979 Enhancer 0.8 Ensembl 550.8 -0.4 -398 1.2 DRAP1 HDAC1 CTCF TAF1 ZNF449 ZFP64 MAX ZIC2 RAD21 ZNF7 AZGP1P1 TRIM4 MBLAC1 CYP3A5 GPC2 AZGP1
GH07I099975 Promoter/Enhancer 1.4 EPDnew ENCODE 0.8 -4.6 -4552 1 FOXA2 MLX ZFP64 ARID4B DMAP1 THRB ZNF48 ZSCAN9 RAD21 YY1 AZGP1 TRIM4 AZGP1P1
GH07I099990 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +10.2 10187 0.9 SMAD1 ATF1 ARNT ZNF766 E2F8 ZNF143 ATF7 REST KAT8 NFIL3 LOC100128334 TRIM4 ZSCAN21 GJC3 ENSG00000237640 ZSCAN25 AZGP1P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around AZGP1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AZGP1P1 Gene

Genomic Locations for AZGP1P1 Gene
chr7:99,980,762-99,987,535
(GRCh38/hg38)
Size:
6,774 bases
Orientation:
Plus strand
chr7:99,578,385-99,585,158
(GRCh37/hg19)

Genomic View for AZGP1P1 Gene

Genes around AZGP1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AZGP1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AZGP1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AZGP1P1 Gene

Proteins for AZGP1P1 Gene

Post-translational modifications for AZGP1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AZGP1P1 Gene

Domains & Families for AZGP1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for AZGP1P1 Gene

Function for AZGP1P1 Gene

Molecular function for AZGP1P1 Gene

GENATLAS Biochemistry:
zinc alpha-2-glycoprotein,pseudogene 1

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AZGP1P1 Gene

Localization for AZGP1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AZGP1P1 Gene

Pathways & Interactions for AZGP1P1 Gene

SuperPathways for AZGP1P1 Gene

No Data Available

Interacting Proteins for AZGP1P1 Gene

Gene Ontology (GO) - Biological Process for AZGP1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AZGP1P1 Gene

Drugs & Compounds for AZGP1P1 Gene

No Compound Related Data Available

Transcripts for AZGP1P1 Gene

mRNA/cDNA for AZGP1P1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for AZGP1P1 Gene

Alpha-2-glycoprotein 1, zinc-binding pseudogene 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for AZGP1P1 Gene

No ASD Table

Relevant External Links for AZGP1P1 Gene

GeneLoc Exon Structure for
AZGP1P1
ECgene alternative splicing isoforms for
AZGP1P1

Expression for AZGP1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AZGP1P1 Gene

mRNA differential expression in normal tissues according to GTEx for AZGP1P1 Gene

This gene is overexpressed in Liver (x33.9), Prostate (x6.9), and Minor Salivary Gland (x4.6).

Protein differential expression in normal tissues from HIPED for AZGP1P1 Gene

This gene is overexpressed in Urine (39.4), Serum (14.3), and Lung (7.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for AZGP1P1 Gene



Protein tissue co-expression partners for AZGP1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of AZGP1P1 Gene:

AZGP1P1

SOURCE GeneReport for Unigene cluster for AZGP1P1 Gene:

Hs.721816
genes like me logo Genes that share expression patterns with AZGP1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AZGP1P1 Gene

Orthologs for AZGP1P1 Gene

Evolution for AZGP1P1 Gene

ENSEMBL:
Gene Tree for AZGP1P1 (if available)
TreeFam:
Gene Tree for AZGP1P1 (if available)

No data available for Orthologs for AZGP1P1 Gene

Paralogs for AZGP1P1 Gene

No data available for Paralogs for AZGP1P1 Gene

Variants for AZGP1P1 Gene

Sequence variations from dbSNP and Humsavar for AZGP1P1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1001157933 -- 99,982,186(+) G/C intron_variant
rs1001382020 -- 99,980,630(+) C/G upstream_transcript_variant
rs1001475124 -- 99,981,030(+) C/G intron_variant
rs1003150651 -- 99,979,746(+) AA/A upstream_transcript_variant
rs1003285537 -- 99,983,895(+) A/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for AZGP1P1 Gene

Variant ID Type Subtype PubMed ID
esv23518 CNV gain 19812545
esv2734888 CNV deletion 23290073
esv32694 CNV loss 17666407
nsv433391 CNV gain 18776910
nsv469687 CNV loss 16826518
nsv510966 OTHER complex 20534489
nsv607930 CNV loss 21841781
nsv824234 CNV loss 20364138
nsv970912 CNV duplication 23825009

Additional Variant Information for AZGP1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AZGP1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for AZGP1P1 Gene

Disorders for AZGP1P1 Gene

Additional Disease Information for AZGP1P1

No disorders were found for AZGP1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AZGP1P1 Gene

Publications for AZGP1P1 Gene

  1. Human Zn-alpha 2-glycoprotein: complete genomic sequence, identification of a related pseudogene and relationship to class I major histocompatibility complex genes. (PMID: 8307568) Freije JP … López-Otín C (Genomics 1993) 2 3 58
  2. Molecular cloning and chromosomal assignment of the gene for human Zn-alpha 2-glycoprotein. (PMID: 8241150) Ueyama H … Ohkubo I (Biochemistry 1993) 2 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  4. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 3 58

Products for AZGP1P1 Gene

Sources for AZGP1P1 Gene

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