Aliases for ATP8B5P Gene

Aliases for ATP8B5P Gene

  • ATPase Phospholipid Transporting 8B5, Pseudogene 2 3 5
  • Flippase Expressed In Testis Splicing Form A Pseudogene 2 3
  • ATPase, Class I, Type 8B, Member 5, Pseudogene 2 3
  • FetA 2 3
  • ATPase, Class I, Type 8B Family Pseudogene 3
  • Zinc Finger, AN1-Type Domain 6 Pseudogene 3
  • ATP8B5P 5

External Ids for ATP8B5P Gene

Previous GeneCards Identifiers for ATP8B5P Gene

  • GC09P035407

Summaries for ATP8B5P Gene

GeneCards Summary for ATP8B5P Gene

ATP8B5P (ATPase Phospholipid Transporting 8B5, Pseudogene) is a Pseudogene.

Additional gene information for ATP8B5P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ATP8B5P Gene

Genomics for ATP8B5P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ATP8B5P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J035404 Promoter/Enhancer 0.8 Ensembl ENCODE 600.7 -0.8 -810 2.6 POLR2A NRF1 KLF9 EZH2 CTCF TAF1 TBP ATP8B5P lnc-UNC13B-2 PIGO piR-49246 RUSC2 UNC13B
GH09J036035 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.3 +631.5 631494 4.6 BRCA1 PRDM10 ZNF692 RBFOX2 POLR2A PATZ1 SP1 ZNF501 ZNF600 YY1 RECK GLIPR2 ATP8B5P OR2S2 ENSG00000276730
GH09J035423 Enhancer 0.9 Ensembl ENCODE 0.4 +17.3 17325 1.9 GATAD2A TFE3 RCOR2 RXRB CEBPA FOXK2 SOX13 FOXA2 MAFF TEAD1 UNC13B FAM214B piR-38351-487 ATP8B5P lnc-UNC13B-2 RUSC2
GH09J035415 Enhancer 0.6 Ensembl ENCODE 0.4 +9.0 9046 0.8 CTCF RAD21 HLF SMC3 PHF24 ATP8B5P lnc-UNC13B-2 piR-38351-487 RUSC2 UNC13B
GH09J035477 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 +70.5 70489 0.9 GATAD2A CTCF ZNF143 RFX1 REST RAD21 TRIM22 RUNX3 ZNF316 MAFF FAM214B C9orf131 piR-48938 RUSC2 MN298678-138 lnc-RUSC2-2 ATP8B5P UNC13B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ATP8B5P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ATP8B5P Gene

Genomic Locations for ATP8B5P Gene
chr9:35,406,755-35,483,035
(GRCh38/hg38)
Size:
76,281 bases
Orientation:
Plus strand
chr9:35,406,752-35,483,026
(GRCh37/hg19)
Size:
76,275 bases
Orientation:
Plus strand

Genomic View for ATP8B5P Gene

Genes around ATP8B5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATP8B5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATP8B5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP8B5P Gene

Proteins for ATP8B5P Gene

Post-translational modifications for ATP8B5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATP8B5P Gene

Domains & Families for ATP8B5P Gene

Gene Families for ATP8B5P Gene

genes like me logo Genes that share domains with ATP8B5P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ATP8B5P Gene

Function for ATP8B5P Gene

Phenotypes for ATP8B5P Gene

genes like me logo Genes that share phenotypes with ATP8B5P: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATP8B5P Gene

Localization for ATP8B5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ATP8B5P Gene

Pathways & Interactions for ATP8B5P Gene

PathCards logo

SuperPathways for ATP8B5P Gene

No Data Available

Gene Ontology (GO) - Biological Process for ATP8B5P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ATP8B5P Gene

Drugs & Compounds for ATP8B5P Gene

No Compound Related Data Available

Transcripts for ATP8B5P Gene

mRNA/cDNA for ATP8B5P Gene

6 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ATP8B5P Gene

No ASD Table

Relevant External Links for ATP8B5P Gene

GeneLoc Exon Structure for
ATP8B5P

Expression for ATP8B5P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ATP8B5P Gene

mRNA differential expression in normal tissues according to GTEx for ATP8B5P Gene

This gene is overexpressed in Testis (x29.4).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ATP8B5P

SOURCE GeneReport for Unigene cluster for ATP8B5P Gene:

Hs.575661
genes like me logo Genes that share expression patterns with ATP8B5P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ATP8B5P Gene

Orthologs for ATP8B5P Gene

Evolution for ATP8B5P Gene

ENSEMBL:
Gene Tree for ATP8B5P (if available)
TreeFam:
Gene Tree for ATP8B5P (if available)

No data available for Orthologs for ATP8B5P Gene

Paralogs for ATP8B5P Gene

No data available for Paralogs for ATP8B5P Gene

Variants for ATP8B5P Gene

Structural Variations from Database of Genomic Variants (DGV) for ATP8B5P Gene

Variant ID Type Subtype PubMed ID
nsv1030303 CNV gain 25217958
nsv1125318 OTHER inversion 24896259
nsv474476 CNV novel sequence insertion 20440878
nsv831545 CNV loss 17160897
nsv982211 CNV duplication 23825009

Additional Variant Information for ATP8B5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ATP8B5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for ATP8B5P Gene

Disorders for ATP8B5P Gene

Additional Disease Information for ATP8B5P

No disorders were found for ATP8B5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ATP8B5P Gene

Publications for ATP8B5P Gene

  1. Identification of a novel mouse P4-ATPase family member highly expressed during spermatogenesis. (PMID: 19657017) Xu P … Ding XY (Journal of cell science 2009) 2 3
  2. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 3
  3. Muscle function and postural balance in lifelong trained male footballers compared with sedentary elderly men and youngsters. (PMID: 20210903) Sundstrup E … Krustrup P (Scandinavian journal of medicine & science in sports 2010) 2
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for ATP8B5P Gene

Sources for ATP8B5P Gene