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Aliases for ATP6V1FNB Gene

Aliases for ATP6V1FNB Gene

  • ATP6V1F Neighbor 2 3
  • Uncharacterized Protein LOC100130705 3
  • AC025594.2 5

External Ids for ATP6V1FNB Gene

Summaries for ATP6V1FNB Gene

GeneCards Summary for ATP6V1FNB Gene

ATP6V1FNB (ATP6V1F Neighbor) is a Protein Coding gene.

Additional gene information for ATP6V1FNB Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ATP6V1FNB Gene

Genomics for ATP6V1FNB Gene

GeneHancer (GH) Regulatory Elements for ATP6V1FNB Gene

Promoters and enhancers for ATP6V1FNB Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J128868 Enhancer 1.1 Ensembl ENCODE 7.6 +3.4 3371 2.4 PTBP1 NFIB KLF17 KLF14 ZEB1 ZNF335 GLIS2 ZNF143 EGR2 SP3 GC07P129011 GC07P128978 ATP6V1FNB ENSG00000230715 LOC392787 METTL2B KCP
GH07J128875 Enhancer 0.5 ENCODE 8 +10.2 10164 1 MCM3 BHLHE40 RCOR1 MNT CHD2 ENSG00000242588 ENSG00000243302 ENSG00000230715 ENSG00000243679 RPS10P15 CDC26P1 ENSG00000229413 RN7SL81P TNPO3 RBM28
GH07J128862 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.7 -3.1 -3103 2.4 HDGF HNRNPUL1 PKNOX1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ATP6V1F FLNC-AS1 ENSG00000243302 ENSG00000230715 ENSG00000243679 ENSG00000242588 TNPO3 ENSG00000229413 RPS10P15 ENSG00000273270
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ATP6V1FNB on UCSC Golden Path with GeneCards custom track

Genomic Locations for ATP6V1FNB Gene

Genomic Locations for ATP6V1FNB Gene
chr7:128,866,308-128,872,047
(GRCh38/hg38)
Size:
5,740 bases
Orientation:
Plus strand
chr7:128,510,821-128,512,098
(GRCh37/hg19)

Genomic View for ATP6V1FNB Gene

Genes around ATP6V1FNB on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATP6V1FNB Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATP6V1FNB Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP6V1FNB Gene

Proteins for ATP6V1FNB Gene

  • Protein details for ATP6V1FNB Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GUX0-A0A1B0GUX0_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GUX0

    Protein attributes for ATP6V1FNB Gene

    Size:
    176 amino acids
    Molecular mass:
    20389 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ATP6V1FNB Gene

Post-translational modifications for ATP6V1FNB Gene

No Post-translational modifications

Other Protein References for ATP6V1FNB Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ATP6V1FNB Gene

Domains & Families for ATP6V1FNB Gene

Protein Domains for ATP6V1FNB Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ATP6V1FNB: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ATP6V1FNB Gene

Function for ATP6V1FNB Gene

Phenotypes From GWAS Catalog for ATP6V1FNB Gene

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ATP6V1FNB

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATP6V1FNB Gene

Localization for ATP6V1FNB Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ATP6V1FNB Gene

Pathways & Interactions for ATP6V1FNB Gene

SuperPathways for ATP6V1FNB Gene

No Data Available

Interacting Proteins for ATP6V1FNB Gene

Gene Ontology (GO) - Biological Process for ATP6V1FNB Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ATP6V1FNB Gene

Drugs & Compounds for ATP6V1FNB Gene

No Compound Related Data Available

Transcripts for ATP6V1FNB Gene

mRNA/cDNA for ATP6V1FNB Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ATP6V1FNB

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ATP6V1FNB Gene

No ASD Table

Relevant External Links for ATP6V1FNB Gene

GeneLoc Exon Structure for
ATP6V1FNB
ECgene alternative splicing isoforms for
ATP6V1FNB

Expression for ATP6V1FNB Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ATP6V1FNB Gene

Orthologs for ATP6V1FNB Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for ATP6V1FNB Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC740649 33
  • 98.86 (n)
mouse
(Mus musculus)
Mammalia Gm9047 33
  • 82.39 (n)
Atp6v1fnb 16
Species where no ortholog for ATP6V1FNB was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ATP6V1FNB Gene

ENSEMBL:
Gene Tree for ATP6V1FNB (if available)
TreeFam:
Gene Tree for ATP6V1FNB (if available)

Paralogs for ATP6V1FNB Gene

No data available for Paralogs for ATP6V1FNB Gene

Variants for ATP6V1FNB Gene

Sequence variations from dbSNP and Humsavar for ATP6V1FNB Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000158557 -- 128,867,359(+) A/C intron_variant
rs1000367261 -- 128,870,159(+) T/G 3_prime_UTR_variant
rs1001111000 -- 128,869,076(+) T/C 3_prime_UTR_variant
rs1001162110 -- 128,866,041(+) G/T upstream_transcript_variant
rs1001422788 -- 128,871,129(+) G/A/C 3_prime_UTR_variant

Additional Variant Information for ATP6V1FNB Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ATP6V1FNB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ATP6V1FNB Gene

Disorders for ATP6V1FNB Gene

No disorders were found for ATP6V1FNB Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ATP6V1FNB Gene

Publications for ATP6V1FNB Gene

No publications were found for ATP6V1FNB Gene.

Products for ATP6V1FNB Gene

Sources for ATP6V1FNB Gene

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