Free for academic non-profit institutions. Other users need a Commercial license
This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A, three B, and two G subunits, as well as a C, D, E, F, and H subunit. The V1 domain contains the ATP catalytic site. This gene encodes alternate transcriptional splice variants, encoding different V1 domain E subunit isoforms. Pseudogenes for this gene have been found in the genome. [provided by RefSeq, Jul 2008]
ATP6V1E1 (ATPase H+ Transporting V1 Subunit E1) is a Protein Coding gene. Diseases associated with ATP6V1E1 include Cutis Laxa, Autosomal Recessive, Type Iic and Autosomal Recessive Cutis Laxa Type Ii Classic Type. Among its related pathways are Synaptic vesicle cycle and Signaling by GPCR. Gene Ontology (GO) annotations related to this gene include ATPase binding and proton-exporting ATPase activity, phosphorylative mechanism. An important paralog of this gene is ATP6V1E2.
H+-ATPase (also known as vacuolar ATPase, V-ATPase) is a enzyme transporter that functions to acidify intracellular compartments in eukaryotic cells. It is ubiquitously expressed and is present in endomembrane organelles such as vacuoles, lysosomes and endosomes.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005515 | protein binding | IPI | 11399750 |
GO:0008553 | proton-exporting ATPase activity, phosphorylative mechanism | IBA | 21873635 |
GO:0016787 | hydrolase activity | IEA | -- |
GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEA | -- |
GO:0051117 | ATPase binding | IPI | 20717956 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005623 | cell | IEA | -- |
GO:0005737 | cytoplasm | IEA | -- |
GO:0005765 | lysosomal membrane | HDA | 17897319 |
GO:0005768 | endosome | ISS | -- |
GO:0005829 | cytosol | TAS | -- |
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | Insulin receptor recycling | ||
2 | Innate Immune System |
.61
|
|
3 | PI3K-Akt signaling pathway | ||
4 | Metabolism | ||
5 | mTOR signaling pathway (KEGG) |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0006811 | ion transport | IEA | -- |
GO:0008286 | insulin receptor signaling pathway | TAS | -- |
GO:0016241 | regulation of macroautophagy | NAS | 22982048 |
GO:0033572 | transferrin transport | TAS | -- |
GO:0034220 | ion transmembrane transport | TAS | -- |
Name | Status | Disease Links | Group | Role | Mechanism of Action | Clinical Trials |
---|---|---|---|---|---|---|
tiludronate | Approved, Investigational, Vet_approved | Pharma | Target, inhibitor | 2 | ||
Water | Approved | Pharma | 0 | |||
Bafilomycin A1 | Experimental | Pharma | V-ATPase inhibitor,selective and reversible, H+-ATPase (vacuolar) inhibitor | 0 | ||
Concanamycin A | Experimental | Pharma | V-type (vacuolar) H+-ATPase inhibitor, H+-ATPase (vacuolar) inhibitor | 0 | ||
ATP | Investigational | Nutra | Agonist, Activator, Partial agonist, Antagonist, Full agonist, Gating inhibitor, Pore Blocker, Potentiation | 0 |
Name | Synonyms | Role | CAS Number | PubChem IDs | PubMed IDs | |
---|---|---|---|---|---|---|
ADP |
|
Agonist, Full agonist, Partial agonist, Gating inhibitor, Antagonist | 58-64-0 |
|
||
Phosphate |
|
14066-19-4, 14265-44-2 |
|
Compound | Action | Cas Number |
---|---|---|
Bafilomycin A1 | H+-ATPase (vacuolar) inhibitor | 88899-55-2 |
Concanamycin A | H+-ATPase (vacuolar) inhibitor | 80890-47-7 |
Compound | Action | Cas Number |
---|---|---|
Thonzonium Bromide | surface active agent and inhibitor of V-ATPase proton transport | 553-08-2 |
ExUns: | 1a | · | 1b | · | 1c | ^ | 2 | ^ | 3a | · | 3b | ^ | 4a | · | 4b | ^ | 5a | · | 5b | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9a | · | 9b |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SP1: | - | - | - | ||||||||||||||||||||||||||
SP2: | - | - | - | - | |||||||||||||||||||||||||
SP3: | - | - | |||||||||||||||||||||||||||
SP4: | - | ||||||||||||||||||||||||||||
SP5: |
This gene was present in the common ancestor of eukaryotes.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | ATP6V1E1 30 |
|
||
Dog (Canis familiaris) |
Mammalia | -- 31 |
|
OneToMany | |
ATP6V1E1 30 |
|
||||
-- 31 |
|
OneToMany | |||
-- 31 |
|
OneToMany | |||
Cow (Bos Taurus) |
Mammalia | ATP6V1E1 30 31 |
|
OneToOne | |
Mouse (Mus musculus) |
Mammalia | Atp6v1e1 30 17 31 |
|
OneToOne | |
Rat (Rattus norvegicus) |
Mammalia | Atp6v1e1 30 |
|
||
Oppossum (Monodelphis domestica) |
Mammalia | -- 31 |
|
ManyToMany | |
-- 31 |
|
ManyToMany | |||
-- 31 |
|
ManyToMany | |||
Platypus (Ornithorhynchus anatinus) |
Mammalia | -- 31 |
|
OneToMany | |
Chicken (Gallus gallus) |
Aves | ATP6V1E1 30 31 |
|
OneToMany | |
Lizard (Anolis carolinensis) |
Reptilia | -- 31 |
|
OneToMany | |
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | atp6v1e1 30 |
|
||
MGC75761 30 |
|
||||
Zebrafish (Danio rerio) |
Actinopterygii | si:ch211-266k8.3 31 |
|
ManyToMany | |
atp6v1e1b 30 31 |
|
ManyToMany | |||
atp6v1e1 30 |
|
||||
Rainbow Trout (Oncorhynchus mykiss) |
Actinopterygii | Omy.9254 30 |
|
||
Fruit Fly (Drosophila melanogaster) |
Insecta | Vha26 30 31 |
|
OneToMany | |
African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP002401 30 |
|
||
Worm (Caenorhabditis elegans) |
Secernentea | vha-8 30 31 |
|
OneToMany | |
Baker's yeast (Saccharomyces cerevisiae) |
Saccharomycetes | VMA4 30 31 33 |
|
OneToMany | |
K. Lactis Yeast (Kluyveromyces lactis) |
Saccharomycetes | KLLA0F02541g 30 |
|
||
Thale Cress (Arabidopsis thaliana) |
eudicotyledons | VHA-E2 30 |
|
||
Rice (Oryza sativa) |
Liliopsida | Os05g0480700 30 |
|
||
Sea Squirt (Ciona savignyi) |
Ascidiacea | CSA.5232 31 |
|
OneToMany | |
Fission Yeast (Schizosaccharomyces pombe) |
Schizosaccharomycetes | vma4 30 |
|
||
Bread mold (Neurospora crassa) |
Ascomycetes | NCU07446 30 |
|
||
Sea Vase (Ciona intestinalis) |
Ascidiacea | Cin.3363 30 |
|
SNP ID | Clinical significance and condition | Chr 22 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
708704 | Likely Benign: not provided | 17,594,620(-) | C/A | INTRON_VARIANT | |
710162 | Benign: not provided | 17,612,851(-) | C/T | SYNONYMOUS_VARIANT | |
738784 | Likely Benign: not provided | 17,619,482(-) | T/C | SYNONYMOUS_VARIANT,INTRON_VARIANT | |
745375 | Likely Benign: not provided | 17,600,018(-) | G/A | INTRON_VARIANT | |
746824 | Likely Benign: not provided | 17,612,888(-) | G/A | INTRON_VARIANT |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv1278e212 | CNV | loss | 25503493 |
dgv2428n106 | CNV | deletion | 24896259 |
dgv4464n100 | CNV | gain | 25217958 |
dgv4465n100 | CNV | gain | 25217958 |
esv2272803 | CNV | deletion | 18987734 |
esv2667900 | CNV | deletion | 23128226 |
esv3557907 | CNV | deletion | 23714750 |
esv3568229 | CNV | loss | 25503493 |
esv3647227 | CNV | loss | 21293372 |
esv3647228 | CNV | loss | 21293372 |
esv3893428 | CNV | loss | 25118596 |
esv3893429 | CNV | gain | 25118596 |
nsv1065055 | CNV | gain | 25217958 |
nsv191259 | CNV | deletion | 16902084 |
nsv3553 | CNV | deletion | 18451855 |
nsv428385 | CNV | gain+loss | 18775914 |
nsv510802 | CNV | deletion | 20534489 |
nsv526826 | CNV | gain | 19592680 |
nsv955472 | CNV | deletion | 24416366 |
nsv9871 | CNV | loss | 18304495 |
Disorder | Aliases | PubMed IDs |
---|---|---|
cutis laxa, autosomal recessive, type iic |
|
|
autosomal recessive cutis laxa type ii classic type |
|
|
cutis laxa |
|
|
cutis laxa, autosomal recessive, type iid |
|
|
congenital disorder of glycosylation, type iio |
|
|