Aliases for ATP5PDP4 Gene

Aliases for ATP5PDP4 Gene

  • ATP Synthase Peripheral Stalk Subunit D Pseudogene 4 2 3 5
  • ATP Synthase, H+ Transporting, Mitochondrial Fo Complex, Subunit D, Pseudogene 4 2 3
  • ATP Synthase, H+ Transporting, Mitochondrial Fo Complex Subunit D Pseudogene 4 2 3
  • ATP Synthase, H+ Transporting, Mitochondrial Fo Complex, Subunit D Pseudogene 3
  • ATP5PDP4 5
  • ATP5HP4 3

External Ids for ATP5PDP4 Gene

Previous HGNC Symbols for ATP5PDP4 Gene

  • ATP5HP4

Summaries for ATP5PDP4 Gene

GeneCards Summary for ATP5PDP4 Gene

ATP5PDP4 (ATP Synthase Peripheral Stalk Subunit D Pseudogene 4) is a Pseudogene.

Additional gene information for ATP5PDP4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ATP5PDP4 Gene

Genomics for ATP5PDP4 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ATP5PDP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J068640 Enhancer 0.8 ENCODE dbSUPER 600.7 +1.9 1877 1.8 IKZF2 EED ARID3A RELB RUNX3 GATAD2B BCLAF1 ARNT NBN IKZF1 ATP5PDP4 piR-50709-001 NUP107 MDM2 SNORA70G RAP1B lnc-NUP107-26
GH12J068642 Enhancer 0.7 FANTOM5 Ensembl dbSUPER 600.7 -0.6 -563 1.6 ZBTB33 ATP5PDP4 piR-50709-001 NUP107 RPL7P42 ENSG00000247363 LINC02384 MDM1 RAP1B piR-51037-001 lnc-NUP107-26
GH12J068803 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 10 -165.4 -165355 10.4 SP1 HNRNPL CREB1 GATAD2A CTCF ZBTB33 PRDM10 ZNF629 REST TFE3 MDM2 NONHSAG011624.2 NUP107 CPSF6 KRT8P39 RPL10P12 SLC35E3 RAP1B ATP5PDP4 ENSG00000256678
GH12J068644 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 -4.0 -3962 4.8 FOXA1 PKNOX1 RUNX3 JUNB IRF4 BATF ATF4 piR-51037-001 NUP107 MDM2 RPL7P42 ENSG00000247363 LINC02384 MDM1 ENSG00000256678 SLC35E3 ATP5PDP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ATP5PDP4 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ATP5PDP4 Gene

Genomic Locations for ATP5PDP4 Gene
chr12:68,642,445-68,643,038
(GRCh38/hg38)
Size:
594 bases
Orientation:
Minus strand
chr12:69,036,223-69,036,818
(GRCh37/hg19)
Size:
596 bases
Orientation:
Minus strand

Genomic View for ATP5PDP4 Gene

Genes around ATP5PDP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATP5PDP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATP5PDP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP5PDP4 Gene

Proteins for ATP5PDP4 Gene

Post-translational modifications for ATP5PDP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATP5PDP4 Gene

Domains & Families for ATP5PDP4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ATP5PDP4 Gene

Function for ATP5PDP4 Gene

Phenotypes From GWAS Catalog for ATP5PDP4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATP5PDP4 Gene

Localization for ATP5PDP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ATP5PDP4 Gene

Pathways & Interactions for ATP5PDP4 Gene

PathCards logo

SuperPathways for ATP5PDP4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ATP5PDP4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ATP5PDP4 Gene

Drugs & Compounds for ATP5PDP4 Gene

No Compound Related Data Available

Transcripts for ATP5PDP4 Gene

mRNA/cDNA for ATP5PDP4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ATP5PDP4 Gene

No ASD Table

Relevant External Links for ATP5PDP4 Gene

GeneLoc Exon Structure for
ATP5PDP4

Expression for ATP5PDP4 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ATP5PDP4 Gene

Orthologs for ATP5PDP4 Gene

Evolution for ATP5PDP4 Gene

ENSEMBL:
Gene Tree for ATP5PDP4 (if available)
TreeFam:
Gene Tree for ATP5PDP4 (if available)

No data available for Orthologs for ATP5PDP4 Gene

Paralogs for ATP5PDP4 Gene

No data available for Paralogs for ATP5PDP4 Gene

Variants for ATP5PDP4 Gene

Additional Variant Information for ATP5PDP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ATP5PDP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ATP5PDP4 Gene

Disorders for ATP5PDP4 Gene

No disorders were found for ATP5PDP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ATP5PDP4 Gene

Publications for ATP5PDP4 Gene

No publications were found for ATP5PDP4 Gene.

No data available for Mastermind for ATP5PDP4 Gene

Products for ATP5PDP4 Gene

Sources for ATP5PDP4 Gene