Aliases for ATP5PBP5 Gene

Aliases for ATP5PBP5 Gene

  • ATP Synthase Peripheral Stalk-Membrane Subunit B Pseudogene 5 2 3 5
  • ATP Synthase, H+ Transporting, Mitochondrial Fo Complex Subunit B1 Pseudogene 5 2 3
  • ATP Synthase, H+ Transporting, Mitochondrial Fo Complex, Subunit B1 Pseudogene 5 2
  • ATP Synthase, H+ Transporting, Mitochondrial F0 Complex, Subunit B1 Pseudogene 3
  • ATP5F1P5 3
  • ATP5PBP5 5

External Ids for ATP5PBP5 Gene

Previous HGNC Symbols for ATP5PBP5 Gene

  • ATP5F1P5

Summaries for ATP5PBP5 Gene

GeneCards Summary for ATP5PBP5 Gene

ATP5PBP5 (ATP Synthase Peripheral Stalk-Membrane Subunit B Pseudogene 5) is a Pseudogene.

Additional gene information for ATP5PBP5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ATP5PBP5 Gene

Genomics for ATP5PBP5 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ATP5PBP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J123228 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 11.6 +271.6 271609 8.9 CTCF KDM1A ZNF300 ZNF776 POLR2A ZNF37A PKNOX1 CEBPA ZNF561 SCRT2 ZNF202 CLMP ATP5PBP5 ENSG00000254710 RF00017-1058 lnc-CLMP-1 GRAMD1B
GH11J122720 Enhancer 0.7 ENCODE dbSUPER 5.7 -237.8 -237792 4.8 JUND FOXA2 FOS FOSL2 BHLHE40 ZFP64 MAX UBASH3B ATP5PBP5 CRTAM ENSG00000239079 lnc-BSX-2
GH11J122977 Enhancer 0.9 FANTOM5 Ensembl ENCODE 0.4 +17.3 17330 1.6 EZH2 SCRT2 USF1 YY1 POLR2A ZNF335 GABPB1 TAF1 USF2 ZBTB8A JHY BSX lnc-HSPA8-3 ATP5PBP5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ATP5PBP5 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ATP5PBP5 Gene

Genomic Locations for ATP5PBP5 Gene
chr11:122,960,253-122,961,284
(GRCh38/hg38)
Size:
1,032 bases
Orientation:
Plus strand
chr11:122,831,035-122,831,794
(GRCh37/hg19)
Size:
760 bases
Orientation:
Plus strand

Genomic View for ATP5PBP5 Gene

Genes around ATP5PBP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATP5PBP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATP5PBP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP5PBP5 Gene

Proteins for ATP5PBP5 Gene

Post-translational modifications for ATP5PBP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATP5PBP5 Gene

Domains & Families for ATP5PBP5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ATP5PBP5 Gene

Function for ATP5PBP5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATP5PBP5 Gene

Localization for ATP5PBP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ATP5PBP5 Gene

Pathways & Interactions for ATP5PBP5 Gene

PathCards logo

SuperPathways for ATP5PBP5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ATP5PBP5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ATP5PBP5 Gene

Drugs & Compounds for ATP5PBP5 Gene

No Compound Related Data Available

Transcripts for ATP5PBP5 Gene

mRNA/cDNA for ATP5PBP5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ATP5PBP5 Gene

No ASD Table

Relevant External Links for ATP5PBP5 Gene

GeneLoc Exon Structure for
ATP5PBP5

Expression for ATP5PBP5 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ATP5PBP5 Gene

Orthologs for ATP5PBP5 Gene

Evolution for ATP5PBP5 Gene

ENSEMBL:
Gene Tree for ATP5PBP5 (if available)
TreeFam:
Gene Tree for ATP5PBP5 (if available)

No data available for Orthologs for ATP5PBP5 Gene

Paralogs for ATP5PBP5 Gene

No data available for Paralogs for ATP5PBP5 Gene

Variants for ATP5PBP5 Gene

Additional Variant Information for ATP5PBP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ATP5PBP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ATP5PBP5 Gene

Disorders for ATP5PBP5 Gene

No disorders were found for ATP5PBP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ATP5PBP5 Gene

Publications for ATP5PBP5 Gene

No publications were found for ATP5PBP5 Gene.

No data available for Mastermind for ATP5PBP5 Gene

Products for ATP5PBP5 Gene

Sources for ATP5PBP5 Gene