Free for academic non-profit institutions. Other users need a Commercial license
Aliases for ATP5PBP5 Gene
Aliases for ATP5PBP5 Gene
- ATP Synthase Peripheral Stalk-Membrane Subunit B Pseudogene 5 2 3 5
- ATP Synthase, H+ Transporting, Mitochondrial Fo Complex Subunit B1 Pseudogene 5 2 3
- ATP Synthase, H+ Transporting, Mitochondrial Fo Complex, Subunit B1 Pseudogene 5 2
- ATP Synthase, H+ Transporting, Mitochondrial F0 Complex, Subunit B1 Pseudogene 3
- ATP5F1P5 3
- ATP5PBP5 5
External Ids for ATP5PBP5 Gene
- HGNC: 39746
- Entrez Gene: 100128516
- Ensembl: ENSG00000254944
Previous HGNC Symbols for ATP5PBP5 Gene
- ATP5F1P5
Summaries for ATP5PBP5 Gene
GeneCards Summary for ATP5PBP5 Gene
ATP5PBP5 (ATP Synthase Peripheral Stalk-Membrane Subunit B Pseudogene 5) is a Pseudogene.
Additional gene information for ATP5PBP5 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ATP5PBP5 Gene
Genomics for ATP5PBP5 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ATP5PBP5 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J123228 | Enhancer | 1.3 | FANTOM5 Ensembl ENCODE dbSUPER | 11.6 | +271.6 | 271609 | 8.9 | CTCF KDM1A ZNF300 ZNF776 POLR2A ZNF37A PKNOX1 CEBPA ZNF561 SCRT2 | ZNF202 CLMP ATP5PBP5 ENSG00000254710 RF00017-1058 lnc-CLMP-1 GRAMD1B | |
| GH11J122720 | Enhancer | 0.7 | ENCODE dbSUPER | 5.7 | -237.8 | -237792 | 4.8 | JUND FOXA2 FOS FOSL2 BHLHE40 ZFP64 MAX | UBASH3B ATP5PBP5 CRTAM ENSG00000239079 lnc-BSX-2 | |
| GH11J122977 | Enhancer | 0.9 | FANTOM5 Ensembl ENCODE | 0.4 | +17.3 | 17330 | 1.6 | EZH2 SCRT2 USF1 YY1 POLR2A ZNF335 GABPB1 TAF1 USF2 ZBTB8A | JHY BSX lnc-HSPA8-3 ATP5PBP5 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ATP5PBP5 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for ATP5PBP5 Gene
Genomic Locations for ATP5PBP5 Gene
- chr11:122,960,253-122,961,284
- (GRCh38/hg38)
- Size:
- 1,032 bases
- Orientation:
- Plus strand
- chr11:122,831,035-122,831,794
- (GRCh37/hg19)
- Size:
- 760 bases
- Orientation:
- Plus strand
Genomic View for ATP5PBP5 Gene
Genes around ATP5PBP5 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11q24.1 by HGNC
- 11q24.1 by Entrez Gene
- 11q24.1 by Ensembl
ATP5PBP5 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ATP5PBP5 Gene
Proteins for ATP5PBP5 Gene
Post-translational modifications for ATP5PBP5 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ATP5PBP5
- Origene Custom Protein Services for ATP5PBP5
No data available for DME Specific Peptides for ATP5PBP5 Gene
Domains & Families for ATP5PBP5 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ATP5PBP5 Gene
Function for ATP5PBP5 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ATP5PBP5 - Select products 50% OFF >
- * ATP5PBP5 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for ATP5PBP5
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for ATP5PBP5 - Select products 50% OFF >
- * ATP5PBP5 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATP5PBP5 Gene
Localization for ATP5PBP5 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ATP5PBP5 Gene
Transcripts for ATP5PBP5 Gene
mRNA/cDNA for ATP5PBP5 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000526403 760 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ATP5PBP5 - Select products 50% OFF >
- * ATP5PBP5 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for ATP5PBP5
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for ATP5PBP5 - Select products 50% OFF >
- * ATP5PBP5 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
Relevant External Links for ATP5PBP5 Gene
- GeneLoc Exon Structure for
- ATP5PBP5
Expression for ATP5PBP5 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ATP5PBP5 Gene
Orthologs for ATP5PBP5 Gene
No data available for Orthologs for ATP5PBP5 Gene
Paralogs for ATP5PBP5 Gene
No data available for Paralogs for ATP5PBP5 Gene
Variants for ATP5PBP5 Gene
Additional Variant Information for ATP5PBP5 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ATP5PBP5
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ATP5PBP5 Gene
Disorders for ATP5PBP5 Gene
No disorders were found for ATP5PBP5 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ATP5PBP5 Gene
Publications for ATP5PBP5 Gene
No publications were found for ATP5PBP5 Gene.
No data available for Mastermind for ATP5PBP5 Gene
Products for ATP5PBP5 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ATP5PBP5
- Origene Custom Protein Services for ATP5PBP5
- Browse OriGene Inhibitory RNA Products For ATP5PBP5
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ATP5PBP5
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ATP5PBP5
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ATP5PBP5
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ATP5PBP5
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ATP5PBP5
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ATP5PBP5
Sources for ATP5PBP5 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB