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Aliases for ATP11AUN Gene

Aliases for ATP11AUN Gene

  • ATP11A Upstream Neighbor 2 3 5
  • Putative ATP11A Upstream Neighbor Protein 3 4
  • Small Blood Protein 1 2 3
  • C13orf35 3 4
  • Chromosome 13 Open Reading Frame 35 2
  • Putative Protein ATP11AUN 3
  • SMABLO1 3

External Ids for ATP11AUN Gene

Previous HGNC Symbols for ATP11AUN Gene

  • C13orf35

Previous GeneCards Identifiers for ATP11AUN Gene

  • GC13P113302

Summaries for ATP11AUN Gene

GeneCards Summary for ATP11AUN Gene

ATP11AUN (ATP11A Upstream Neighbor) is a Protein Coding gene.

Additional gene information for ATP11AUN Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ATP11AUN Gene

Genomics for ATP11AUN Gene

GeneHancer (GH) Regulatory Elements for ATP11AUN Gene

Promoters and enhancers for ATP11AUN Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J112684 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 11.7 +42.8 42832 9.9 HDGF ARID4B DMAP1 YY1 ZNF143 ZNF263 SP3 SP5 REST KAT8 ATP11A GC13M112689 LOC102725228 TUBGCP3 PCID2 ATP11AUN ATP11A-AS1 MCF2L
GH13J112767 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 16.8 +121.2 121186 1.4 HDGF PKNOX1 BACH1 EBF1 BMI1 IRF4 RELA ZFHX2 ATF7 IKZF2 ATP11A ATP11AUN MCF2L ATP11A-AS1 ENSG00000277545
GH13J112605 Promoter/Enhancer 1.4 Ensembl ENCODE 11.4 -40.8 -40807 1.7 PKNOX1 ARID4B SIN3A ZNF2 ZNF48 ZNF143 RUNX3 DEK SP3 SP5 TUBGCP3 ENSG00000277159 ATP11AUN ATP11A-AS1 MCF2L GC13P112588
GH13J112709 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.6 +64.9 64899 4.1 PKNOX1 ARNT ZFP64 ARID4B SIN3A ZNF2 YY1 FOS SP5 REST ATP11A-AS1 ATP11AUN MCF2L ATP11A GC13M112689 PIR54522
GH13J112885 Enhancer 1.3 Ensembl ENCODE dbSUPER 10.6 +238.9 238894 1.1 ARID4B SIN3A FEZF1 ZNF48 RAD21 ZNF335 GLIS2 RCOR1 DEK PAF1 GC13P112885 ATP11A TUBGCP3 ATP11AUN ATP11A-AS1 MCF2L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ATP11AUN on UCSC Golden Path with GeneCards custom track

Genomic Locations for ATP11AUN Gene

Genomic Locations for ATP11AUN Gene
chr13:112,647,044-112,684,497
(GRCh38/hg38)
Size:
37,454 bases
Orientation:
Plus strand
chr13:113,301,358-113,338,811
(GRCh37/hg19)

Genomic View for ATP11AUN Gene

Genes around ATP11AUN on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATP11AUN Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATP11AUN Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATP11AUN Gene

Proteins for ATP11AUN Gene

  • Protein details for ATP11AUN Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZP68-ATPUN_HUMAN
    Recommended name:
    Putative protein ATP11AUN
    Protein Accession:
    Q6ZP68

    Protein attributes for ATP11AUN Gene

    Size:
    121 amino acids
    Molecular mass:
    13416 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ATP11AUN Gene

Post-translational modifications for ATP11AUN Gene

No Post-translational modifications

Other Protein References for ATP11AUN Gene

REFSEQ proteins:

No data available for DME Specific Peptides for ATP11AUN Gene

Domains & Families for ATP11AUN Gene

Protein Domains for ATP11AUN Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ATP11AUN: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ATP11AUN Gene

Function for ATP11AUN Gene

Phenotypes From GWAS Catalog for ATP11AUN Gene

genes like me logo Genes that share phenotypes with ATP11AUN: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ATP11AUN

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATP11AUN Gene

Localization for ATP11AUN Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ATP11AUN gene
Compartment Confidence
extracellular 2
cytosol 2
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ATP11AUN Gene

Pathways & Interactions for ATP11AUN Gene

SuperPathways for ATP11AUN Gene

No Data Available

Interacting Proteins for ATP11AUN Gene

Gene Ontology (GO) - Biological Process for ATP11AUN Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ATP11AUN Gene

Drugs & Compounds for ATP11AUN Gene

No Compound Related Data Available

Transcripts for ATP11AUN Gene

mRNA/cDNA for ATP11AUN Gene

(2) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ATP11AUN

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ATP11AUN Gene

No ASD Table

Relevant External Links for ATP11AUN Gene

GeneLoc Exon Structure for
ATP11AUN
ECgene alternative splicing isoforms for
ATP11AUN

Expression for ATP11AUN Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ATP11AUN Gene

mRNA differential expression in normal tissues according to GTEx for ATP11AUN Gene

This gene is overexpressed in Testis (x14.9) and Whole Blood (x4.8).

Protein differential expression in normal tissues from HIPED for ATP11AUN Gene

This gene is overexpressed in Bone (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ATP11AUN Gene



Protein tissue co-expression partners for ATP11AUN Gene

NURSA nuclear receptor signaling pathways regulating expression of ATP11AUN Gene:

ATP11AUN
genes like me logo Genes that share expression patterns with ATP11AUN: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ATP11AUN Gene

Orthologs for ATP11AUN Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ATP11AUN Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ATP11AUN 33
  • 98.33 (n)
C13orf35 34
  • 94 (a)
OneToOne
Species where no ortholog for ATP11AUN was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ATP11AUN Gene

ENSEMBL:
Gene Tree for ATP11AUN (if available)
TreeFam:
Gene Tree for ATP11AUN (if available)

Paralogs for ATP11AUN Gene

No data available for Paralogs for ATP11AUN Gene

Variants for ATP11AUN Gene

Sequence variations from dbSNP and Humsavar for ATP11AUN Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000009655 -- 112,681,820(+) T/G intron_variant
rs1000019949 -- 112,671,956(+) G/A intron_variant
rs1000027524 -- 112,676,297(+) AAAAAA/AAAAAAA intron_variant
rs1000070311 -- 112,684,388(+) C/T 3_prime_UTR_variant
rs1000091232 -- 112,672,971(+) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ATP11AUN Gene

Variant ID Type Subtype PubMed ID
dgv246e201 CNV deletion 23290073
dgv3417n54 CNV gain 21841781
dgv381e199 CNV deletion 23128226
esv1056044 CNV insertion 17803354
esv1364864 CNV insertion 17803354
esv2220906 CNV deletion 18987734
esv2669774 CNV deletion 23128226
esv2748162 CNV deletion 23290073
esv2748164 CNV deletion 23290073
esv2748165 CNV deletion 23290073
esv2748166 CNV deletion 23290073
esv2748167 CNV deletion 23290073
esv2748168 CNV deletion 23290073
esv2748169 CNV deletion 23290073
esv2748170 CNV deletion 23290073
esv28365 CNV gain+loss 19812545
esv3166 CNV loss 18987735
esv3352915 CNV duplication 20981092
esv3633583 CNV gain 21293372
esv3633584 CNV loss 21293372
nsv1037307 CNV gain 25217958
nsv1044644 CNV gain 25217958
nsv1045238 CNV gain 25217958
nsv1113612 CNV deletion 24896259
nsv1142841 CNV tandem duplication 24896259
nsv1144701 CNV deletion 24896259
nsv518792 CNV loss 19592680
nsv521686 CNV gain 19592680
nsv563226 CNV gain 21841781
nsv563227 CNV gain 21841781
nsv563228 CNV gain 21841781

Variation tolerance for ATP11AUN Gene

Residual Variation Intolerance Score: 77.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.14; 23.11% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ATP11AUN Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ATP11AUN

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ATP11AUN Gene

Disorders for ATP11AUN Gene

Additional Disease Information for ATP11AUN

No disorders were found for ATP11AUN Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ATP11AUN Gene

Publications for ATP11AUN Gene

  1. Common variants at 10 genomic loci influence hemoglobin A₁(C) levels via glycemic and nonglycemic pathways. (PMID: 20858683) Soranzo N … Meigs JB (Diabetes 2010) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4 58
  3. The DNA sequence and analysis of human chromosome 13. (PMID: 15057823) Dunham A … Ross MT (Nature 2004) 4 58

Products for ATP11AUN Gene

Sources for ATP11AUN Gene

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