Aliases for ATG12P2 Gene

Aliases for ATG12P2 Gene

  • Autophagy Related 12 Pseudogene 2 2 3 5
  • ATG12 Autophagy Related 12 Homolog (S. Cerevisiae) Pseudogene 2 2
  • ATG12 Autophagy Related 12 Homolog Pseudogene 2 3

External Ids for ATG12P2 Gene

Previous GeneCards Identifiers for ATG12P2 Gene

  • GC00U931056
  • GC02M215618
  • GC02M223766

Summaries for ATG12P2 Gene

GeneCards Summary for ATG12P2 Gene

ATG12P2 (Autophagy Related 12 Pseudogene 2) is a Pseudogene.

Additional gene information for ATG12P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ATG12P2 Gene

Genomics for ATG12P2 Gene

GeneHancer (GH) Regulatory Elements for ATG12P2 Gene

Promoters and enhancers for ATG12P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J222903 Enhancer 1 Ensembl ENCODE 500.7 -0.7 -661 8.6 CTCF POLR2G NCOR1 FOS REST RAD21 TRIM22 TEAD1 ZKSCAN8 SMC3 ATG12P2 lnc-FARSB-7 ACSL3 FARSB ENSG00000203531 ENSG00000234193
GH02J222910 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 -8.1 -8141 5.6 CTCF SIN3A EP300 FOXA1 MEF2C RCOR1 RAD21 TRIM22 POLR2A RELA ENSG00000203531 ACSL3 SGPP2 ATG12P2 ENSG00000234193
GH02J222917 Enhancer 0.6 Ensembl 0.4 -12.4 -12442 0.2 TEAD1 FOXA2 ZFHX2 FOXP1 BCL6 NFIL3 IKZF5 HLF NR2F6 SOX5 ENSG00000234193 ACSL3 ACSL3-AS1 ATG12P2
GH02J222916 Enhancer 0.5 Ensembl 0.4 -11.9 -11942 0.4 ZNF585B RBM22 IKZF5 NR2F6 SP5 ZNF770 ENSG00000234193 ATG12P2 ACSL3
GH02J222918 Enhancer 0.3 Ensembl 0.4 -13.0 -13042 0.2 RBM22 ENSG00000234193 ACSL3-AS1 ATG12P2 ACSL3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ATG12P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ATG12P2 Gene

Genomic Locations for ATG12P2 Gene
chr2:222,901,664-222,905,059
(GRCh38/hg38)
Size:
3,396 bases
Orientation:
Minus strand
chr2:223,766,382-223,769,777
(GRCh37/hg19)
Size:
3,396 bases
Orientation:
Minus strand

Genomic View for ATG12P2 Gene

Genes around ATG12P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ATG12P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ATG12P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ATG12P2 Gene

Proteins for ATG12P2 Gene

Post-translational modifications for ATG12P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ATG12P2 Gene

Domains & Families for ATG12P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ATG12P2 Gene

Function for ATG12P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATG12P2 Gene

Localization for ATG12P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ATG12P2 Gene

Pathways & Interactions for ATG12P2 Gene

PathCards logo

SuperPathways for ATG12P2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ATG12P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ATG12P2 Gene

Drugs & Compounds for ATG12P2 Gene

No Compound Related Data Available

Transcripts for ATG12P2 Gene

mRNA/cDNA for ATG12P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ATG12P2 Gene

No ASD Table

Relevant External Links for ATG12P2 Gene

GeneLoc Exon Structure for
ATG12P2

Expression for ATG12P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ATG12P2 Gene

genes like me logo Genes that share expression patterns with ATG12P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ATG12P2 Gene

Orthologs for ATG12P2 Gene

Evolution for ATG12P2 Gene

ENSEMBL:
Gene Tree for ATG12P2 (if available)
TreeFam:
Gene Tree for ATG12P2 (if available)

No data available for Orthologs for ATG12P2 Gene

Paralogs for ATG12P2 Gene

No data available for Paralogs for ATG12P2 Gene

Variants for ATG12P2 Gene

Additional Variant Information for ATG12P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ATG12P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ATG12P2 Gene

Disorders for ATG12P2 Gene

No disorders were found for ATG12P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ATG12P2 Gene

Publications for ATG12P2 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 54

Products for ATG12P2 Gene

Sources for ATG12P2 Gene