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Aliases for ATF4P3 Gene
Aliases for ATF4P3 Gene
External Ids for ATF4P3 Gene
- HGNC: 788
- NCBI Entrez Gene: 643159
- Ensembl: ENSG00000228218
Previous HGNC Symbols for ATF4P3 Gene
- ATF4C
Previous GeneCards Identifiers for ATF4P3 Gene
- GC17M074224
Summaries for ATF4P3 Gene
GeneCards Summary for ATF4P3 Gene
ATF4P3 (Activating Transcription Factor 4 Pseudogene 3) is a Pseudogene.
Additional gene information for ATF4P3 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ATF4P3 Gene
Genomics for ATF4P3 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ATF4P3 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17J076225 | Promoter/Enhancer | 0.9 | Ensembl dbSUPER | 250.7 | +0.5 | 485 | 2 | PRDM10 THRAP3 ZBTB33 EGR1 ATF2 MLLT1 KDM1A ATF7 | ATF4P3 piR-56777-001 RNF157 QRICH2 ATP5MGP6 FOXJ1 | |
| GH17J076234 | Enhancer | 1.2 | Ensembl ENCODE dbSUPER | 0.4 | -7.2 | -7151 | 0.8 | TBP IKZF1 NONO GTF2E2 NFATC3 VEZF1 NBN IRF4 MAFF TRIM25 | GGA3 ENSG00000267546 RNF157 ATF4P3 FOXJ1 | |
| GH17J076240 | Enhancer | 1.1 | ENCODE dbSUPER | 0.4 | -11.1 | -11099 | 0.3 | MXD4 CEBPA ZFP64 HOMEZ THAP11 FOXA2 ZNF511 SMAD4 SAP130 RXRA | RNF157 ATF4P3 FOXJ1 | |
| GH17J076232 | Enhancer | 0.7 | Ensembl ENCODE | 0.4 | -5.5 | -5475 | 0.9 | ZNF316 NFE2 MAFK JUND MAFG MEIS2 NFE2L2 PKNOX1 CEBPB FOS | RNF157 QRICH2 ATF4P3 FOXJ1 | |
| GH17J076239 | Enhancer | 0.6 | ENCODE dbSUPER | 0.4 | -11.4 | -11385 | 0 | ZNF316 CBX2 ARID4B ZGPAT | RNF157 ATF4P3 FOXJ1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ATF4P3 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for ATF4P3 Gene
Latest Assembly
- chr17:76,225,665-76,227,086
- (GRCh38/hg38)
- Size:
- 1,422 bases
- Orientation:
- Minus strand
Previous Assembly
- chr17:74,221,746-74,223,167
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 1,422 bases
- Orientation:
- Minus strand
- chr17:74,221,832-74,222,887
- (GRCh37/hg19 by Ensembl)
- Size:
- 1,056 bases
- Orientation:
- Minus strand
Genomic View for ATF4P3 Gene
Genes around ATF4P3 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q25.1 by HGNC
- 17q25.1 by Entrez Gene
- 17q25.1 by Ensembl
ATF4P3 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ATF4P3 Gene
Proteins for ATF4P3 Gene
Post-translational modifications for ATF4P3 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ATF4P3
- Origene Custom Protein Services for ATF4P3
Assay products for research
No data available for DME Specific Peptides for ATF4P3 Gene
Domains & Families for ATF4P3 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ATF4P3 Gene
Function for ATF4P3 Gene
Phenotypes for ATF4P3 Gene
- GenomeRNAi human phenotypes for ATF4P3:
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ATF4P3 - Starting at $85 >
- * ATF4P3 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for ATF4P3
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ATF4P3 Gene
Localization for ATF4P3 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ATF4P3 Gene
Transcripts for ATF4P3 Gene
mRNA/cDNA for ATF4P3 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000433309 1056 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ATF4P3 - Starting at $85 >
- * ATF4P3 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for ATF4P3
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for ATF4P3 Gene
- GeneLoc Exon Structure for
- ATF4P3
Expression for ATF4P3 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ATF4P3 Gene
Orthologs for ATF4P3 Gene
No data available for Orthologs for ATF4P3 Gene
Paralogs for ATF4P3 Gene
No data available for Paralogs for ATF4P3 Gene
Variants for ATF4P3 Gene
Additional Variant Information for ATF4P3 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ATF4P3
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ATF4P3 Gene
Disorders for ATF4P3 Gene
No disorders were found for ATF4P3 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ATF4P3 Gene
Publications for ATF4P3 Gene
- A sequence-ready BAC/PAC contig and partial transcript map of approximately 1.5 Mb in human chromosome 17q25 comprising multiple disease genes. (PMID: 10610718) Kuhlenbäumer G … Timmerman V (Genomics 1999) 2 3
ExternalLinks
Products for ATF4P3 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ATF4P3
- Origene Custom Protein Services for ATF4P3
- Browse OriGene Inhibitory RNA Products For ATF4P3
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ATF4P3
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ATF4P3
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- antibodies-online: Search results for available ATF4P3 related products ranked by validation data
- antibodies-online: Search results for available ATF4P3 related products ranked by validation data
- antibodies-online: Search results for available ATF4P3 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ATF4P3
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ATF4P3
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ATF4P3
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ATF4P3
Sources for ATF4P3 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB