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Aliases for ASMTL-AS1 Gene

Subcategory (RNA class) for ASMTL-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ASMTL-AS1 Gene

  • ASMTL Antisense RNA 1 2 3 5
  • ASMTL Antisense RNA 1 (Non-Protein Coding) 2 3
  • ASMTL Antisense RNA (Non-Protein Coding) 2
  • Chromosome X And Y Open Reading Frame 2 2
  • Non-Protein Coding RNA 105 2
  • NCRNA00105 3
  • ASMTL-AS 3
  • CXYorf2 3

External Ids for ASMTL-AS1 Gene

Previous HGNC Symbols for ASMTL-AS1 Gene

  • CXYorf2
  • NCRNA00105

Previous GeneCards Identifiers for ASMTL-AS1 Gene

  • GC0XP001521

Summaries for ASMTL-AS1 Gene

Entrez Gene Summary for ASMTL-AS1 Gene

  • This gene serves as the antisense to the acetylserotonin O-methyltransferase-like gene. Multiple non-coding transcript variants have been found for this gene. [provided by RefSeq, Oct 2011]

GeneCards Summary for ASMTL-AS1 Gene

ASMTL-AS1 (ASMTL Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ASMTL-AS1 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ASMTL-AS1 Gene

Genomics for ASMTL-AS1 Gene

GeneHancer (GH) Regulatory Elements for ASMTL-AS1 Gene

Promoters and enhancers for ASMTL-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI001452 Promoter 1.8 EPDnew Ensembl 0.2 +52.7 52670 2.4 HDGF PKNOX1 ARID4B SIN3A ZBTB7B BRCA1 ZNF48 YY1 POLR2B GLIS2 ASMTL ASMTL-AS1
GH0XI001405 Enhancer 0.6 FANTOM5 0.4 +5.1 5126 0.3 ZNF776 ZNF473 ZNF571 ZNF114 ZBTB17 AKAP17A ASMT ASMTL SLC25A6 CRLF2 P2RY8 CSF2RA IL3RA ASMTL-AS1
GH0XI001451 Promoter 0.6 Ensembl 0.2 +51.2 51170 0.2 ZBTB7A ASMTL ASMTL-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ASMTL-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ASMTL-AS1 Gene

Genomic Locations for ASMTL-AS1 Gene
14,891 bases
Plus strand

Genomic View for ASMTL-AS1 Gene

Genes around ASMTL-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ASMTL-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ASMTL-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ASMTL-AS1 Gene

Proteins for ASMTL-AS1 Gene

Post-translational modifications for ASMTL-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ASMTL-AS1 Gene

Domains & Families for ASMTL-AS1 Gene

Gene Families for ASMTL-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ASMTL-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ASMTL-AS1 Gene

Function for ASMTL-AS1 Gene

Phenotypes for ASMTL-AS1 Gene

GenomeRNAi human phenotypes for ASMTL-AS1:
genes like me logo Genes that share phenotypes with ASMTL-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ASMTL-AS1 Gene

Localization for ASMTL-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ASMTL-AS1 Gene

Pathways & Interactions for ASMTL-AS1 Gene

SuperPathways for ASMTL-AS1 Gene

No Data Available

Interacting Proteins for ASMTL-AS1 Gene

Gene Ontology (GO) - Biological Process for ASMTL-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ASMTL-AS1 Gene

Drugs & Compounds for ASMTL-AS1 Gene

No Compound Related Data Available

Transcripts for ASMTL-AS1 Gene

Unigene Clusters for ASMTL-AS1 Gene

ASMTL antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ASMTL-AS1 Gene

No ASD Table

Relevant External Links for ASMTL-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ASMTL-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ASMTL-AS1 Gene

SOURCE GeneReport for Unigene cluster for ASMTL-AS1 Gene:

genes like me logo Genes that share expression patterns with ASMTL-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ASMTL-AS1 Gene

Orthologs for ASMTL-AS1 Gene

Evolution for ASMTL-AS1 Gene

Gene Tree for ASMTL-AS1 (if available)
Gene Tree for ASMTL-AS1 (if available)

No data available for Orthologs for ASMTL-AS1 Gene

Paralogs for ASMTL-AS1 Gene

No data available for Paralogs for ASMTL-AS1 Gene

Variants for ASMTL-AS1 Gene

Sequence variations from dbSNP and Humsavar for ASMTL-AS1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs111066028 -- 1,407,046(+) A/G intron_variant
rs111161743 -- 1,406,777(+) C/G intron_variant
rs111161744 -- 1,406,789(+) C/G intron_variant
rs111161745 -- 1,406,818(+) A/G intron_variant
rs111252091 -- 1,400,838(+) T/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ASMTL-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1299e201 CNV deletion 23290073
esv21933 CNV gain+loss 19812545
esv2662469 CNV deletion 23128226
esv2666429 CNV deletion 23128226
esv2667783 CNV deletion 23128226
esv2669866 CNV deletion 23128226
esv2678263 CNV deletion 23128226
esv2739698 CNV deletion 23290073
esv2739699 CNV deletion 23290073
esv2739700 CNV deletion 23290073
esv2739701 CNV deletion 23290073
esv2739702 CNV deletion 23290073
esv2739703 CNV deletion 23290073
esv2739704 CNV deletion 23290073
esv2739705 CNV deletion 23290073
esv29996 CNV loss 17803354
esv3558484 CNV deletion 23714750
nsv1075349 CNV deletion 25765185
nsv1076695 CNV duplication 25765185
nsv1077213 CNV deletion 25765185
nsv1078699 CNV duplication 25765185
nsv1115920 CNV duplication 24896259
nsv1119323 CNV duplication 24896259
nsv1119379 CNV duplication 24896259
nsv1126960 CNV deletion 24896259
nsv1144311 CNV deletion 24896259
nsv1152984 CNV duplication 26484159
nsv953723 CNV deletion 24416366

Additional Variant Information for ASMTL-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ASMTL-AS1 Gene

Disorders for ASMTL-AS1 Gene

Additional Disease Information for ASMTL-AS1

No disorders were found for ASMTL-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ASMTL-AS1 Gene

Publications for ASMTL-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 2 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ASMTL-AS1 Gene

Sources for ASMTL-AS1 Gene

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