Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ASH1L-AS1 Gene

Subcategory (RNA class) for ASH1L-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ASH1L-AS1 Gene

  • ASH1L Antisense RNA 1 2 3 5
  • ASH1L Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ASH1L-AS1 Gene

ORGUL Members for ASH1L-AS1 Gene

Previous GeneCards Identifiers for ASH1L-AS1 Gene

  • GC01P155533

Summaries for ASH1L-AS1 Gene

GeneCards Summary for ASH1L-AS1 Gene

ASH1L-AS1 (ASH1L Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for ASH1L-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ASH1L-AS1 Gene

Genomics for ASH1L-AS1 Gene

GeneHancer (GH) Regulatory Elements for ASH1L-AS1 Gene

Promoters and enhancers for ASH1L-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I155561 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 561.2 +1.2 1220 4.4 HDGF PKNOX1 CLOCK SMAD1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 ASH1L-AS1 ASH1L CLK2 GON4L KHDC4 THBS3 SSR2 ENSG00000271267 GLMP RUSC1-AS1
GH01I155242 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 47.8 -317.7 -317739 2.9 FEZF1 YBX1 IRF4 YY1 ZNF213 E2F8 ZNF416 ZNF143 ZNF548 SP3 GBA KHDC4 GON4L CLK2 ENSG00000271267 MSTO1 MSTO2P RUSC1-AS1 THBS3 SHC1
GH01I154998 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 28.1 -557.5 -557530 11.3 CLOCK MLX YBX1 DMAP1 YY1 ZNF213 E2F8 ZNF416 ZNF143 SP3 ZBTB7B GON4L CLK2 UBAP2L KHDC4 ENSG00000271267 RUSC1-AS1 MSTO1 THBS3 MSTO2P
GH01I155222 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 36.8 -336.3 -336250 5.9 ZFP64 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC ZC3H11A MEF2D GBAP1 KHDC4 MSTO1 ENSG00000271267 GON4L MSTO2P CLK2 RUSC1-AS1 LOC101928120 THBS3
GH01I156111 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 20.1 +559.4 559408 19.4 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 LMNA GON4L CLK2 RRNAD1 KHDC4 LOC246784 MSTO1 MSTO2P PRCC ISG20L2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ASH1L-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ASH1L-AS1 Gene

Genomic Locations for ASH1L-AS1 Gene
chr1:155,561,981-155,563,944
(GRCh38/hg38)
Size:
1,964 bases
Orientation:
Plus strand
chr1:155,531,772-155,533,775
(GRCh37/hg19)

Genomic View for ASH1L-AS1 Gene

Genes around ASH1L-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ASH1L-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ASH1L-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ASH1L-AS1 Gene

Proteins for ASH1L-AS1 Gene

Post-translational modifications for ASH1L-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ASH1L-AS1 Gene

Domains & Families for ASH1L-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ASH1L-AS1 Gene

Function for ASH1L-AS1 Gene

Phenotypes From GWAS Catalog for ASH1L-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ASH1L-AS1 Gene

Localization for ASH1L-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ASH1L-AS1 Gene

Pathways & Interactions for ASH1L-AS1 Gene

SuperPathways for ASH1L-AS1 Gene

No Data Available

Interacting Proteins for ASH1L-AS1 Gene

Gene Ontology (GO) - Biological Process for ASH1L-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ASH1L-AS1 Gene

Drugs & Compounds for ASH1L-AS1 Gene

No Compound Related Data Available

Transcripts for ASH1L-AS1 Gene

mRNA/cDNA for ASH1L-AS1 Gene

(6) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ASH1L-AS1 Gene

ASH1L antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ASH1L-AS1 Gene

No ASD Table

Relevant External Links for ASH1L-AS1 Gene

GeneLoc Exon Structure for
ASH1L-AS1
ECgene alternative splicing isoforms for
ASH1L-AS1

Expression for ASH1L-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ASH1L-AS1 Gene

SOURCE GeneReport for Unigene cluster for ASH1L-AS1 Gene:

Hs.568693
genes like me logo Genes that share expression patterns with ASH1L-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ASH1L-AS1 Gene

Orthologs for ASH1L-AS1 Gene

Evolution for ASH1L-AS1 Gene

ENSEMBL:
Gene Tree for ASH1L-AS1 (if available)
TreeFam:
Gene Tree for ASH1L-AS1 (if available)

No data available for Orthologs for ASH1L-AS1 Gene

Paralogs for ASH1L-AS1 Gene

No data available for Paralogs for ASH1L-AS1 Gene

Variants for ASH1L-AS1 Gene

Sequence variations from dbSNP and Humsavar for ASH1L-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1001362810 -- 155,562,147(+) A/G non_coding_transcript_variant
rs1001712122 -- 155,563,109(+) T/C non_coding_transcript_variant
rs1001870218 -- 155,560,304(+) A/C upstream_transcript_variant
rs1002361049 -- 155,560,598(+) C/G upstream_transcript_variant
rs1003905494 -- 155,563,304(+) T/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ASH1L-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2718418 CNV deletion 23290073
esv33869 CNV loss 17666407
esv3890671 CNV gain 25118596
nsv946417 CNV duplication 23825009

Additional Variant Information for ASH1L-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ASH1L-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ASH1L-AS1 Gene

Disorders for ASH1L-AS1 Gene

Additional Disease Information for ASH1L-AS1

No disorders were found for ASH1L-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ASH1L-AS1 Gene

Publications for ASH1L-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ASH1L-AS1 Gene

Sources for ASH1L-AS1 Gene

Content
Loading form....