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Aliases for ASDURF Gene

Aliases for ASDURF Gene

  • ASNSD1 Upstream Reading Frame 2 3
  • ASNSD1-SEP 3 4
  • ASNSD1 3 5
  • ASNSD1 Small/Short Open Reading Frame-Encoded Polypeptide 4
  • ASNSD1 Upstream Open Reading Frame Protein 3
  • Asparagine Synthetase Domain Containing 1 5
  • Alternative Protein ASNSD1 3

External Ids for ASDURF Gene

Previous GeneCards Identifiers for ASDURF Gene

  • GC02U904496

Summaries for ASDURF Gene

GeneCards Summary for ASDURF Gene

ASDURF (ASNSD1 Upstream Reading Frame) is a Protein Coding gene.

Additional gene information for ASDURF Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ASDURF Gene

Genomics for ASDURF Gene

GeneHancer (GH) Regulatory Elements for ASDURF Gene

Promoters and enhancers for ASDURF Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J189660 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 650.7 +0.5 500 2.3 HDGF PKNOX1 CLOCK FOXA2 SMAD1 MLX ARID4B SIN3A DMAP1 ZNF2 ASNSD1 ASDURF ORMDL1 ANKAR
GH02J189698 Enhancer 0.6 ENCODE 12.5 +37.1 37085 0.2 SRF CTCF RXRA TRIM22 CEBPG ZNF384 RAD21 ZNF148 NFIL3 ATF4 ASNSD1 ASDURF ANKAR ORMDL1 LOC105373793 OSGEPL1-AS1
GH02J189699 Enhancer 0.6 Ensembl 12.5 +37.3 37316 0.2 CTCF SRF RXRA TRIM22 ZNF384 CEBPG ZNF148 ATF7 ASDURF ASNSD1 ANKAR ORMDL1 LOC105373793 OSGEPL1-AS1
GH02J189685 Enhancer 0.6 Ensembl 11.8 +24.5 24516 0.2 PKNOX1 SMAD1 MZF1 ZEB2 CTBP1 PRDM6 NFIC IKZF1 HMBOX1 RUNX3 ASDURF ASNSD1 LOC105373793 ANKAR OSGEPL1-AS1
GH02J189641 Enhancer 0.6 ENCODE 11.1 -20.2 -20195 0.2 SIX4 PKNOX1 DPF2 FEZF1 FOXA1 OSR2 GATA3 BCL6B CUX1 ORMDL1 ASDURF ASNSD1 MSTN ENSG00000276828
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ASDURF on UCSC Golden Path with GeneCards custom track

Genomic Locations for ASDURF Gene

Genomic Locations for ASDURF Gene
chr2:189,661,385-189,670,831
(GRCh38/hg38)
Size:
9,447 bases
Orientation:
Plus strand

Genomic View for ASDURF Gene

Genes around ASDURF on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ASDURF Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ASDURF Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ASDURF Gene

Proteins for ASDURF Gene

  • Protein details for ASDURF Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    L0R819-ASURF_HUMAN
    Recommended name:
    ASNSD1 upstream open reading frame protein
    Protein Accession:
    L0R819

    Protein attributes for ASDURF Gene

    Size:
    96 amino acids
    Molecular mass:
    11250 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ASDURF Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ASDURF Gene

Post-translational modifications for ASDURF Gene

No Post-translational modifications

No data available for DME Specific Peptides for ASDURF Gene

Domains & Families for ASDURF Gene

Protein Domains for ASDURF Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ASDURF: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ASDURF Gene

Function for ASDURF Gene

Gene Ontology (GO) - Molecular Function for ASDURF Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEA --
GO:0042803 protein homodimerization activity IBA --
genes like me logo Genes that share ontologies with ASDURF: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ASDURF Gene

Localization for ASDURF Gene

Subcellular locations from UniProtKB/Swiss-Prot for ASDURF Gene

Cytoplasm.

Gene Ontology (GO) - Cellular Components for ASDURF Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with ASDURF: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ASDURF Gene

Pathways & Interactions for ASDURF Gene

SuperPathways for ASDURF Gene

No Data Available

Gene Ontology (GO) - Biological Process for ASDURF Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006529 asparagine biosynthetic process IEA --
GO:0006541 glutamine metabolic process IEA --
GO:0008150 biological_process ND --
GO:0008652 cellular amino acid biosynthetic process IEA --
genes like me logo Genes that share ontologies with ASDURF: view

No data available for Pathways by source and SIGNOR curated interactions for ASDURF Gene

Drugs & Compounds for ASDURF Gene

No Compound Related Data Available

Transcripts for ASDURF Gene

mRNA/cDNA for ASDURF Gene

(2) REFSEQ mRNAs :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ASDURF Gene

No ASD Table

Relevant External Links for ASDURF Gene

GeneLoc Exon Structure for
ASDURF
ECgene alternative splicing isoforms for
ASDURF

Expression for ASDURF Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ASDURF Gene

Orthologs for ASDURF Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ASDURF Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ASNSD1 34
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ASNSD1 34
  • 82 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ASNSD1 34
  • 81 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Asnsd1 34
  • 77 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ASNSD1 34
  • 69 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ASNSD1 34
  • 50 (a)
OneToOne
chicken
(Gallus gallus)
Aves ASNSD1 34
  • 58 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ASNSD1 34
  • 61 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii asnsd1 34
  • 57 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG17486 34
  • 36 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea M18.3 34
  • 35 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes -- 34
  • 29 (a)
OneToOne
-- 36
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 47 (a)
OneToOne
Species where no ortholog for ASDURF was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for ASDURF Gene

ENSEMBL:
Gene Tree for ASDURF (if available)
TreeFam:
Gene Tree for ASDURF (if available)

Paralogs for ASDURF Gene

No data available for Paralogs for ASDURF Gene

Variants for ASDURF Gene

Additional Variant Information for ASDURF Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ASDURF

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ASDURF Gene

Disorders for ASDURF Gene

No disorders were found for ASDURF Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ASDURF Gene

Publications for ASDURF Gene

  1. Peptidomic discovery of short open reading frame-encoded peptides in human cells. (PMID: 23160002) Slavoff SA … Saghatelian A (Nature chemical biology 2013) 2 3 4 58
  2. Identification and characterization of sORF-encoded polypeptides. (PMID: 25857697) Chu Q … Saghatelian A (Critical reviews in biochemistry and molecular biology 2015) 3 4 58
  3. Direct detection of alternative open reading frames translation products in human significantly expands the proteome. (PMID: 23950983) Vanderperre B … Roucou X (PloS one 2013) 4 58
  4. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier LW … Wilson RK (Nature 2005) 4 58
  5. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for ASDURF Gene

Sources for ASDURF Gene

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