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Aliases for ARSD-AS1 Gene

Subcategory (RNA class) for ARSD-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ARSD-AS1 Gene

  • ARSD Antisense RNA 1 2 3 5
  • ARSD Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for ARSD-AS1 Gene

Previous GeneCards Identifiers for ARSD-AS1 Gene

  • GC0XP002824

Summaries for ARSD-AS1 Gene

GeneCards Summary for ARSD-AS1 Gene

ARSD-AS1 (ARSD Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ARSD-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARSD-AS1 Gene

Genomics for ARSD-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARSD-AS1 Gene

Promoters and enhancers for ARSD-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ002894 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.5 -7525 5.8 PKNOX1 ATF1 ARNT NEUROD1 YY1 TCF12 ZFP91 FOS ATF7 RXRA ARSH ARSD ARSE ARSD-AS1 PIR48029
GH0XJ002888 Enhancer 1 Ensembl ENCODE 0.4 -14.2 -14160 5.1 HDAC1 PKNOX1 ATF1 NFRKB CAVIN1 REST ZEB2 ZNF592 MEF2D NFIC ARSD PIR48029 ARSD-AS1 GC0XP002857
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ARSD-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARSD-AS1 Gene

Genomic Locations for ARSD-AS1 Gene
chrX:2,904,904-2,906,081
(GRCh38/hg38)
Size:
1,178 bases
Orientation:
Plus strand
chrX:2,822,945-2,824,188
(GRCh37/hg19)
Size:
1,244 bases
Orientation:
Plus strand

Genomic View for ARSD-AS1 Gene

Genes around ARSD-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARSD-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARSD-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARSD-AS1 Gene

Function for ARSD-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARSD-AS1 Gene

Localization for ARSD-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARSD-AS1 Gene

Pathways & Interactions for ARSD-AS1 Gene

SuperPathways for ARSD-AS1 Gene

No Data Available

Interacting Proteins for ARSD-AS1 Gene

Gene Ontology (GO) - Biological Process for ARSD-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARSD-AS1 Gene

Drugs & Compounds for ARSD-AS1 Gene

No Compound Related Data Available

Transcripts for ARSD-AS1 Gene

mRNA/cDNA for ARSD-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ARSD-AS1 Gene

No ASD Table

Relevant External Links for ARSD-AS1 Gene

GeneLoc Exon Structure for
ARSD-AS1
ECgene alternative splicing isoforms for
ARSD-AS1

Expression for ARSD-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARSD-AS1 Gene

genes like me logo Genes that share expression patterns with ARSD-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARSD-AS1 Gene

Orthologs for ARSD-AS1 Gene

Evolution for ARSD-AS1 Gene

ENSEMBL:
Gene Tree for ARSD-AS1 (if available)
TreeFam:
Gene Tree for ARSD-AS1 (if available)

No data available for Orthologs for ARSD-AS1 Gene

Paralogs for ARSD-AS1 Gene

No data available for Paralogs for ARSD-AS1 Gene

Variants for ARSD-AS1 Gene

Additional Variant Information for ARSD-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARSD-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARSD-AS1 Gene

Disorders for ARSD-AS1 Gene

Additional Disease Information for ARSD-AS1

No disorders were found for ARSD-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARSD-AS1 Gene

Publications for ARSD-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for ARSD-AS1 Gene

Sources for ARSD-AS1 Gene

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