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Aliases for ARPP21-AS1 Gene

Subcategory (RNA class) for ARPP21-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ARPP21-AS1 Gene

  • ARPP21 Antisense RNA 1 2 3 5
  • ARPP21 Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for ARPP21-AS1 Gene

Previous GeneCards Identifiers for ARPP21-AS1 Gene

  • GC00U933091

Summaries for ARPP21-AS1 Gene

GeneCards Summary for ARPP21-AS1 Gene

ARPP21-AS1 (ARPP21 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ARPP21-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARPP21-AS1 Gene

Genomics for ARPP21-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARPP21-AS1 Gene

Promoters and enhancers for ARPP21-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J035651 Enhancer 0.5 dbSUPER 650.7 -0.7 -717 2.5 SP1 JUND FOSL2 ATF2 ARPP21-AS1 ARPP21 GC03P035745
GH03J035676 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE dbSUPER 11.5 -26.9 -26898 3.8 POLR2A ARPP21 ARPP21-AS1 MIR128-2 GC03P035745
GH03J035680 Promoter/Enhancer 0.7 EPDnew dbSUPER 11.5 -29.0 -28960 0.1 ARPP21 ARPP21-AS1 MIR128-2 GC03P035745
GH03J035684 Enhancer 0.2 dbSUPER 11.5 -33.2 -33178 1.4 ARPP21-AS1 MIR128-2 ARPP21 GC03P035745
GH03J035685 Enhancer 0.2 dbSUPER 11.5 -34.4 -34360 0.9 ARPP21-AS1 MIR128-2 ARPP21 GC03P035745
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ARPP21-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARPP21-AS1 Gene

Genomic Locations for ARPP21-AS1 Gene
chr3:35,650,197-35,651,961
(GRCh38/hg38)
Size:
1,765 bases
Orientation:
Minus strand
chr3:35,691,689-35,693,453
(GRCh37/hg19)

Genomic View for ARPP21-AS1 Gene

Genes around ARPP21-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARPP21-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARPP21-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ARPP21-AS1 Gene

Proteins for ARPP21-AS1 Gene

Post-translational modifications for ARPP21-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARPP21-AS1 Gene

Domains & Families for ARPP21-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARPP21-AS1 Gene

Function for ARPP21-AS1 Gene

Phenotypes From GWAS Catalog for ARPP21-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARPP21-AS1 Gene

Localization for ARPP21-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARPP21-AS1 Gene

Pathways & Interactions for ARPP21-AS1 Gene

SuperPathways for ARPP21-AS1 Gene

No Data Available

Interacting Proteins for ARPP21-AS1 Gene

Gene Ontology (GO) - Biological Process for ARPP21-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARPP21-AS1 Gene

Drugs & Compounds for ARPP21-AS1 Gene

No Compound Related Data Available

Transcripts for ARPP21-AS1 Gene

mRNA/cDNA for ARPP21-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARPP21-AS1 Gene

No ASD Table

Relevant External Links for ARPP21-AS1 Gene

GeneLoc Exon Structure for
ARPP21-AS1
ECgene alternative splicing isoforms for
ARPP21-AS1

Expression for ARPP21-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARPP21-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ARPP21-AS1 Gene

This gene is overexpressed in Brain - Cerebellum (x15.2), Brain - Cerebellar Hemisphere (x12.8), and Muscle - Skeletal (x9.2).
genes like me logo Genes that share expression patterns with ARPP21-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARPP21-AS1 Gene

Orthologs for ARPP21-AS1 Gene

Evolution for ARPP21-AS1 Gene

ENSEMBL:
Gene Tree for ARPP21-AS1 (if available)
TreeFam:
Gene Tree for ARPP21-AS1 (if available)

No data available for Orthologs for ARPP21-AS1 Gene

Paralogs for ARPP21-AS1 Gene

No data available for Paralogs for ARPP21-AS1 Gene

Variants for ARPP21-AS1 Gene

Additional Variant Information for ARPP21-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARPP21-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARPP21-AS1 Gene

Disorders for ARPP21-AS1 Gene

No disorders were found for ARPP21-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ARPP21-AS1 Gene

Publications for ARPP21-AS1 Gene

No publications were found for ARPP21-AS1 Gene.

Products for ARPP21-AS1 Gene

Sources for ARPP21-AS1 Gene

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