Aliases for ARMH2 Gene

Aliases for ARMH2 Gene

  • Armadillo Like Helical Domain Containing 2 2 3 5
  • Armadillo-Like Helical Domain-Containing Protein 2 3 4
  • C6orf229 3 4
  • Chromosome 6 Open Reading Frame 229 2
  • Uncharacterized Protein C6orf229 3
  • ARMH2 5

External Ids for ARMH2 Gene

Previous HGNC Symbols for ARMH2 Gene

  • C6orf229

Summaries for ARMH2 Gene

GeneCards Summary for ARMH2 Gene

ARMH2 (Armadillo Like Helical Domain Containing 2) is a Protein Coding gene.

Additional gene information for ARMH2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ARMH2 Gene

Genomics for ARMH2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ARMH2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J024799 Enhancer 0.9 FANTOM5 Ensembl 600.7 -0.8 -784 1 TFE3 PRDM1 PKNOX1 RXRB SP1 PBX2 TGIF2 NR2C2 AFF1 TEAD1 ARMH2 piR-57460-583 GMNN ALDH5A1 DCDC2 GPLD1 ENSG00000282804
GH06J024797 Enhancer 0.3 Ensembl 600.7 +1.2 1216 0.6 SCRT2 SCRT1 ARMH2 NONHSAG043187.2 GMNN C6orf62 ENSG00000282804
GH06J024773 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +22.9 22853 4.8 ZNF221 SP1 HNRNPL GATAD2A ATF7 PRDM10 REST ZNF629 TFE3 LEF1 GMNN HSALNG0048634 lnc-C6orf229-4 ENSG00000219682 ENSG00000272402 ARMH2
GH06J024802 Enhancer 0.9 Ensembl ENCODE 0.7 -4.1 -4108 1.6 GATAD2A RCOR2 RXRB CEBPA SCRT2 SOX13 TCF7 FOXA1 SMARCC2 FOXA2 piR-57460-583 C6orf62 RIPOR2 ARMH2 ENSG00000282804
GH06J024778 Enhancer 0.8 ENCODE 0.4 +19.4 19438 1.3 GATAD2A STAT3 PRDM1 RXRB RCOR1 TRIM22 GATAD2B CEBPA ATF7 SOX13 C6orf62 GMNN HSALNG0048634 NONHSAG043187.2 ARMH2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ARMH2 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ARMH2

Genomic Locations for ARMH2 Gene

Genomic Locations for ARMH2 Gene
chr6:24,797,335-24,798,917
(GRCh38/hg38)
Size:
1,583 bases
Orientation:
Minus strand
chr6:24,797,549-24,799,117
(GRCh37/hg19)
Size:
1,569 bases
Orientation:
Minus strand

Genomic View for ARMH2 Gene

Genes around ARMH2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARMH2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARMH2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARMH2 Gene

Proteins for ARMH2 Gene

  • Protein details for ARMH2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    H3BNL8-ARMD2_HUMAN
    Recommended name:
    Armadillo-like helical domain-containing protein 2
    Protein Accession:
    H3BNL8

    Protein attributes for ARMH2 Gene

    Size:
    230 amino acids
    Molecular mass:
    26547 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ARMH2 Gene

Post-translational modifications for ARMH2 Gene

No Post-translational modifications

Other Protein References for ARMH2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ARMH2 Gene

Domains & Families for ARMH2 Gene

Gene Families for ARMH2 Gene

Protein Domains for ARMH2 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with ARMH2: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ARMH2 Gene

Function for ARMH2 Gene

Phenotypes From GWAS Catalog for ARMH2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARMH2 Gene

Localization for ARMH2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARMH2 Gene

Pathways & Interactions for ARMH2 Gene

PathCards logo

SuperPathways for ARMH2 Gene

No Data Available

Interacting Proteins for ARMH2 Gene

Gene Ontology (GO) - Biological Process for ARMH2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARMH2 Gene

Drugs & Compounds for ARMH2 Gene

No Compound Related Data Available

Transcripts for ARMH2 Gene

mRNA/cDNA for ARMH2 Gene

1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ARMH2 Gene

No ASD Table

Relevant External Links for ARMH2 Gene

GeneLoc Exon Structure for
ARMH2

Expression for ARMH2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARMH2 Gene

Orthologs for ARMH2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ARMH2 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia LOC101057982 30
  • 99.28 (n)
Dog
(Canis familiaris)
Mammalia LOC102152999 30
  • 81.01 (n)
C6orf229 31
  • 67 (a)
OneToOne
Cow
(Bos Taurus)
Mammalia LOC101904023 30
  • 80.49 (n)
Rat
(Rattus norvegicus)
Mammalia LOC102548126 30
  • 66.82 (n)
Mouse
(Mus musculus)
Mammalia 1700016G14Rik 30
  • 65.88 (n)
Armh2 17
Oppossum
(Monodelphis domestica)
Mammalia C6orf229 31
  • 40 (a)
OneToOne
Lizard
(Anolis carolinensis)
Reptilia C6orf229 31
  • 35 (a)
OneToOne
Species where no ortholog for ARMH2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for ARMH2 Gene

ENSEMBL:
Gene Tree for ARMH2 (if available)
TreeFam:
Gene Tree for ARMH2 (if available)

Paralogs for ARMH2 Gene

No data available for Paralogs for ARMH2 Gene

Variants for ARMH2 Gene

Additional dbSNP identifiers (rs#s) for ARMH2 Gene

Structural Variations from Database of Genomic Variants (DGV) for ARMH2 Gene

Variant ID Type Subtype PubMed ID
nsv508396 CNV deletion 20534489
nsv5227 CNV deletion 18451855
nsv830609 CNV gain 17160897

Variation tolerance for ARMH2 Gene

Gene Damage Index Score: 5.34; 70.75% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ARMH2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARMH2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ARMH2 Gene

Disorders for ARMH2 Gene

No disorders were found for ARMH2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARMH2 Gene

Publications for ARMH2 Gene

  1. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall AJ … Beck S (Nature 2003) 4

Products for ARMH2 Gene

Sources for ARMH2 Gene