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ARMC8 (Armadillo Repeat Containing 8) is a Protein Coding gene. Diseases associated with ARMC8 include Marinesco-Sjogren Syndrome. Among its related pathways are Innate Immune System. Gene Ontology (GO) annotations related to this gene include binding.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH03J138186 | Promoter/Enhancer | 2 | EPDnew Ensembl ENCODE CraniofacialAtlas | 600.7 | +0.8 | 782 | 3.5 | CREB1 GATAD2A HNRNPL PRDM10 REST ZNF629 IKZF1 ZNF692 NFRKB POLR2A | ARMC8 MRAS A4GNT HSALNG0029252 NME9 | |
GH03J138221 | Promoter/Enhancer | 0.6 | Ensembl ENCODE | 12.3 | +35.1 | 35068 | 0.6 | GABPA | HSALNG0029252 ARMC8 DBR1 MRAS NME9 DZIP1L | |
GH03J139117 | Enhancer | 1.2 | FANTOM5 Ensembl ENCODE | 5.2 | +933.1 | 933119 | 7.5 | GATAD2A TFE3 RFX1 JUND FOXA1 MTA2 ZSCAN4 PKNOX1 SP1 ZNF24 | BPESC1 ARMC8 piR-44198-015 PRR23C MRPS22 COPB2 | |
GH03J138211 | Enhancer | 0.5 | Ensembl | 12.8 | +26.1 | 26053 | 3.8 | JUND FOSL1 SPI1 ATF3 PRDM6 | ARMC8 DBR1 NME9 DZIP1L A4GNT PRR23C ESYT3 HSALNG0029252 | |
GH03J138235 | Enhancer | 0.4 | Ensembl | 12.1 | +47.9 | 47852 | 0.2 | RUNX3 JUNB TCF7 | DBR1 ARMC8 DZIP1L HSALNG0029252 piR-35674-370 NME9 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005515 | protein binding | IPI | 17467196 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000151 | ubiquitin ligase complex | IDA | 29911972 |
GO:0005576 | extracellular region | TAS | -- |
GO:0005634 | nucleus | IEA,IDA | 17467196 |
GO:0005737 | cytoplasm | IEA,IDA | 17467196 |
GO:0034657 | GID complex | IBA | 21873635 |
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | Innate Immune System |
.61
|
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IBA | 21873635 |
GO:0043312 | neutrophil degranulation | TAS | -- |
ExUns: | 1a | · | 1b | · | 1c | · | 1d | · | 1e | ^ | 2a | · | 2b | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | ^ | 6 | ^ | 7 | ^ | 8a | · | 8b | · | 8c | ^ | 9a | · | 9b | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13a | · | 13b | · | 13c | · | 13d | ^ | 14 | ^ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SP1: | - | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||
SP2: | - | |||||||||||||||||||||||||||||||||||||||||||||||||||
SP3: | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||
SP4: | - | |||||||||||||||||||||||||||||||||||||||||||||||||||
SP5: | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||||
SP6: | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||||||
SP7: | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||||||
SP8: | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||||
SP9: | - | - | - | - | - | - |
ExUns: | 15 | ^ | 16 |
---|---|---|---|
SP1: | |||
SP2: | |||
SP3: | |||
SP4: | |||
SP5: | |||
SP6: | |||
SP7: | |||
SP8: | |||
SP9: |
This gene was present in the common ancestor of eukaryotes.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | ARMC8 30 31 |
|
OneToOne | |
Platypus (Ornithorhynchus anatinus) |
Mammalia | ARMC8 31 |
|
OneToOne | |
Dog (Canis familiaris) |
Mammalia | ARMC8 30 31 |
|
OneToOne | |
Oppossum (Monodelphis domestica) |
Mammalia | ARMC8 31 |
|
OneToOne | |
Cow (Bos Taurus) |
Mammalia | ARMC8 30 31 |
|
OneToOne | |
Mouse (Mus musculus) |
Mammalia | Armc8 30 17 31 |
|
OneToOne | |
Rat (Rattus norvegicus) |
Mammalia | Armc8 30 |
|
||
Chicken (Gallus gallus) |
Aves | ARMC8 30 31 |
|
OneToOne | |
Lizard (Anolis carolinensis) |
Reptilia | ARMC8 31 |
|
OneToOne | |
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | armc8 30 |
|
||
African clawed frog (Xenopus laevis) |
Amphibia | Xl.3735 30 |
|
||
Zebrafish (Danio rerio) |
Actinopterygii | armc8 30 31 |
|
OneToOne | |
African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP006626 30 |
|
||
Thale Cress (Arabidopsis thaliana) |
eudicotyledons | AT1G51350 30 |
|
||
Rice (Oryza sativa) |
Liliopsida | Os11g0638900 30 |
|
||
Sea Squirt (Ciona savignyi) |
Ascidiacea | CSA.2222 31 |
|
OneToOne |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv2759180 | CNV | loss | 17122850 |
esv2762347 | CNV | gain | 21179565 |
esv3597911 | CNV | gain | 21293372 |
esv3597913 | CNV | gain | 21293372 |
nsv4030 | CNV | insertion | 18451855 |
nsv428422 | CNV | gain+loss | 18775914 |
nsv822263 | CNV | loss | 20364138 |
nsv822264 | CNV | loss | 20364138 |
nsv998106 | CNV | gain | 25217958 |
Disorder | Aliases | PubMed IDs |
---|---|---|
marinesco-sjogren syndrome |
|
|