Aliases for ARMC4P1 Gene

Aliases for ARMC4P1 Gene

  • Armadillo Repeat Containing 4 Pseudogene 1 2 3 5

External Ids for ARMC4P1 Gene

Previous GeneCards Identifiers for ARMC4P1 Gene

  • GC10P027547

Summaries for ARMC4P1 Gene

GeneCards Summary for ARMC4P1 Gene

ARMC4P1 (Armadillo Repeat Containing 4 Pseudogene 1) is a Pseudogene.

Additional gene information for ARMC4P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ARMC4P1 Gene

Genomics for ARMC4P1 Gene

GeneHancer (GH) Regulatory Elements for ARMC4P1 Gene

Promoters and enhancers for ARMC4P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J027258 Promoter 0.5 Ensembl 750.6 +0.3 338 1.4 HLF EZH2 LRRC37A6P ARMC4P1 lnc-ACBD5-1 piR-50129-017 MASTL ANKRD26
GH10J027256 Enhancer 0.3 ENCODE 750.6 -1.4 -1367 0.8 POLR2A ARMC4P1 piR-50129-017 MASTL LRRC37A6P lnc-ACBD5-1 piR-59936-001
GH10J027513 Enhancer 1.2 FANTOM5 Ensembl ENCODE 5.6 +264.0 264039 19.2 ZBTB40 SMARCE1 ZNF362 HLF DACH1 GTF2F1 MAFK PRDM1 SMARCA4 GMEB1 lnc-MASTL-4 RAB18 PTCHD3 MASTL ARMC4P1 FAM210CP ACBD5 piR-52079-025 lnc-MASTL-6 FJ601684-037
GH10J027298 Enhancer 0.5 Ensembl 12.9 +39.6 39639 1.6 ZNF24 CREB1 NFE2 MAFG FOXA1 FOS piR-36393-036 piR-43099-040 piR-43583-039 piR-41399-035 piR-56022-037 piR-45504-038 piR-50308-040 piR-53562-034 piR-48301-034 piR-57176-060
GH10J027285 Enhancer 0.4 ENCODE 13.2 +26.5 26525 0.2 ZNF24 CTCF RAD21 NRF1 ARMC4P1 ACBD5 piR-53431-046 LRRC37A6P lnc-ACBD5-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ARMC4P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARMC4P1 Gene

Genomic Locations for ARMC4P1 Gene
chr10:27,258,762-27,329,145
(GRCh38/hg38)
Size:
70,384 bases
Orientation:
Plus strand
chr10:27,547,691-27,577,753
(GRCh37/hg19)
Size:
30,063 bases
Orientation:
Plus strand

Genomic View for ARMC4P1 Gene

Genes around ARMC4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARMC4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARMC4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARMC4P1 Gene

Proteins for ARMC4P1 Gene

Post-translational modifications for ARMC4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARMC4P1 Gene

Domains & Families for ARMC4P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ARMC4P1 Gene

Function for ARMC4P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARMC4P1 Gene

Localization for ARMC4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARMC4P1 Gene

Pathways & Interactions for ARMC4P1 Gene

PathCards logo

SuperPathways for ARMC4P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ARMC4P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARMC4P1 Gene

Drugs & Compounds for ARMC4P1 Gene

No Compound Related Data Available

Transcripts for ARMC4P1 Gene

mRNA/cDNA for ARMC4P1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ARMC4P1 Gene

No ASD Table

Relevant External Links for ARMC4P1 Gene

GeneLoc Exon Structure for
ARMC4P1
ECgene alternative splicing isoforms for
ARMC4P1

Expression for ARMC4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARMC4P1 Gene

mRNA differential expression in normal tissues according to GTEx for ARMC4P1 Gene

This gene is overexpressed in Testis (x12.2).

NURSA nuclear receptor signaling pathways regulating expression of ARMC4P1 Gene:

ARMC4P1
genes like me logo Genes that share expression patterns with ARMC4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARMC4P1 Gene

Orthologs for ARMC4P1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ARMC4P1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ARMC4 32
  • 98.74 (n)
dog
(Canis familiaris)
Mammalia LOC102151256 32
  • 80.09 (n)
Species where no ortholog for ARMC4P1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ARMC4P1 Gene

ENSEMBL:
Gene Tree for ARMC4P1 (if available)
TreeFam:
Gene Tree for ARMC4P1 (if available)

Paralogs for ARMC4P1 Gene

No data available for Paralogs for ARMC4P1 Gene

Variants for ARMC4P1 Gene

Sequence variations from dbSNP and Humsavar for ARMC4P1 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000044921 -- 27,300,224(+) T/A intron_variant
rs1000167297 -- 27,333,311(+) C/A non_coding_transcript_variant
rs1000198245 -- 27,332,911(+) C/T non_coding_transcript_variant
rs1000270704 -- 27,294,891(+) C/G intron_variant
rs1000276947 -- 27,300,669(+) A/C intron_variant

Additional Variant Information for ARMC4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARMC4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARMC4P1 Gene

Disorders for ARMC4P1 Gene

Additional Disease Information for ARMC4P1

No disorders were found for ARMC4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARMC4P1 Gene

Publications for ARMC4P1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56

No data available for External Links for ARMC4P1 Gene

Products for ARMC4P1 Gene

Sources for ARMC4P1 Gene