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Aliases for ARHGEF7-IT1 Gene

Subcategory (RNA class) for ARHGEF7-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ARHGEF7-IT1 Gene

  • ARHGEF7 Intronic Transcript 1 2 3 5
  • ARHGEF7 Intronic Transcript 1 (Non-Protein Coding) 2 3

External Ids for ARHGEF7-IT1 Gene

Previous GeneCards Identifiers for ARHGEF7-IT1 Gene

  • GC00U933819
  • GC13P111775

Summaries for ARHGEF7-IT1 Gene

GeneCards Summary for ARHGEF7-IT1 Gene

ARHGEF7-IT1 (ARHGEF7 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ARHGEF7-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGEF7-IT1 Gene

Genomics for ARHGEF7-IT1 Gene

GeneHancer (GH) Regulatory Elements for ARHGEF7-IT1 Gene

Promoters and enhancers for ARHGEF7-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J111120 Enhancer 0.7 ENCODE dbSUPER 650.7 -0.4 -399 4.3 ZFHX2 POLR2A EGR1 HLF SCRT2 MNT EGR2 ARHGEF7-IT1 ARHGEF7-AS2 LINC00431 ARHGEF7
GH13J111113 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.4 -6.4 -6427 4.5 ARNT FEZF1 RAD21 YY1 ZNF335 GLIS2 ZNF366 RCOR1 RXRA PPARG ARHGEF7-AS2 ARHGEF7 LINC00368 ARHGEF7-IT1
GH13J111129 Enhancer 0.6 dbSUPER 0.4 +8.3 8296 3.4 JUNB BATF ATF2 IRF4 POLR2A BCL11A IKZF1 ETV6 BCLAF1 IKZF2 GC13M111134 PIR35673 ARHGEF7-IT1 ARHGEF7
GH13J111142 Enhancer 0.2 dbSUPER 0.3 +20.3 20346 0.9 GC13P111143 ARHGEF7 GC13M111134 PIR35673 ARHGEF7-IT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ARHGEF7-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGEF7-IT1 Gene

Genomic Locations for ARHGEF7-IT1 Gene
chr13:111,122,652-111,144,264
(GRCh38/hg38)
Size:
21,613 bases
Orientation:
Plus strand
chr13:111,774,999-111,796,611
(GRCh37/hg19)

Genomic View for ARHGEF7-IT1 Gene

Genes around ARHGEF7-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGEF7-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGEF7-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ARHGEF7-IT1 Gene

Proteins for ARHGEF7-IT1 Gene

Post-translational modifications for ARHGEF7-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGEF7-IT1 Gene

Domains & Families for ARHGEF7-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGEF7-IT1 Gene

Function for ARHGEF7-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGEF7-IT1 Gene

Localization for ARHGEF7-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGEF7-IT1 Gene

Pathways & Interactions for ARHGEF7-IT1 Gene

SuperPathways for ARHGEF7-IT1 Gene

No Data Available

Interacting Proteins for ARHGEF7-IT1 Gene

Gene Ontology (GO) - Biological Process for ARHGEF7-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGEF7-IT1 Gene

Drugs & Compounds for ARHGEF7-IT1 Gene

No Compound Related Data Available

Transcripts for ARHGEF7-IT1 Gene

mRNA/cDNA for ARHGEF7-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGEF7-IT1 Gene

No ASD Table

Relevant External Links for ARHGEF7-IT1 Gene

GeneLoc Exon Structure for
ARHGEF7-IT1
ECgene alternative splicing isoforms for
ARHGEF7-IT1

Expression for ARHGEF7-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARHGEF7-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for ARHGEF7-IT1 Gene

This gene is overexpressed in Testis (x26.5).
genes like me logo Genes that share expression patterns with ARHGEF7-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGEF7-IT1 Gene

Orthologs for ARHGEF7-IT1 Gene

Evolution for ARHGEF7-IT1 Gene

ENSEMBL:
Gene Tree for ARHGEF7-IT1 (if available)
TreeFam:
Gene Tree for ARHGEF7-IT1 (if available)

No data available for Orthologs for ARHGEF7-IT1 Gene

Paralogs for ARHGEF7-IT1 Gene

No data available for Paralogs for ARHGEF7-IT1 Gene

Variants for ARHGEF7-IT1 Gene

Additional Variant Information for ARHGEF7-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGEF7-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARHGEF7-IT1 Gene

Disorders for ARHGEF7-IT1 Gene

Additional Disease Information for ARHGEF7-IT1

No disorders were found for ARHGEF7-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGEF7-IT1 Gene

Publications for ARHGEF7-IT1 Gene

No publications were found for ARHGEF7-IT1 Gene.

Products for ARHGEF7-IT1 Gene

Sources for ARHGEF7-IT1 Gene

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