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Aliases for ARHGEF33 Gene

Aliases for ARHGEF33 Gene

  • Rho Guanine Nucleotide Exchange Factor 33 2 3 5
  • Rho Guanine Nucleotide Exchange Factor (GEF) 33 2

External Ids for ARHGEF33 Gene

Previous GeneCards Identifiers for ARHGEF33 Gene

  • GC02P039118

Summaries for ARHGEF33 Gene

GeneCards Summary for ARHGEF33 Gene

ARHGEF33 (Rho Guanine Nucleotide Exchange Factor 33) is a Protein Coding gene. Among its related pathways are p75 NTR receptor-mediated signalling and Signaling by GPCR. Gene Ontology (GO) annotations related to this gene include Rho guanyl-nucleotide exchange factor activity.

UniProtKB/Swiss-Prot for ARHGEF33 Gene

  • May act as a guanine-nucleotide releasing factor.

Additional gene information for ARHGEF33 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGEF33 Gene

Genomics for ARHGEF33 Gene

GeneHancer (GH) Regulatory Elements for ARHGEF33 Gene

Promoters and enhancers for ARHGEF33 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I038749 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 12.1 -138.9 -138920 3.5 CLOCK MLX ZFP64 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 SRSF7 GEMIN6 SOS1 DHX57 ARHGEF33 GALM ASS1P2 LOC728730 ENSG00000232518
GH02I038095 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 13.6 -792.6 -792574 4.6 PKNOX1 CLOCK ARNT NEUROD1 FEZF1 ZBTB7B GLIS2 ZNF213 KLF7 FOS ENSG00000272054 CYP1B1 CYP1B1-AS1 SRSF7 DHX57 ARHGEF33 RMDN2-AS1 HNRNPLL CEBPZ CDC42EP3
GH02I039215 Enhancer 1.3 FANTOM5 Ensembl ENCODE 13.7 +327.4 327389 2.8 HDAC1 FOXA2 ARNT RARA SIRT6 RUNX3 CREM ZC3H11A ZNF518A ZNF781 SOS1 SRSF7 THUMPD2 ARHGEF33 ENSG00000202309 ENSG00000252473 DHX57 MORN2 CDKL4 GC02M039185
GH02I038238 Enhancer 0.7 ENCODE 25.1 -650.3 -650340 1.2 ZFP64 ZNF140 ZNF266 ZNF697 ZNF664 ZNF213 ZNF433 ZNF202 ZNF680 ZBTB11 LOC102723739 SRSF7 SOS1 DHX57 ARHGEF33 ASS1P2 HNRNPLL ENSG00000229160 ATL2 GC02P038231
GH02I038719 Enhancer 1.1 Ensembl ENCODE dbSUPER 5.3 -168.9 -168941 2 MXI1 MAX EBF1 YY1 GATA3 CBX5 POLR2A BCLAF1 IKZF2 RUNX3 GALM ARHGEF33 SRSF7 ENSG00000232518
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ARHGEF33 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGEF33 Gene

Genomic Locations for ARHGEF33 Gene
chr2:38,889,880-38,975,449
(GRCh38/hg38)
Size:
85,570 bases
Orientation:
Plus strand
chr2:39,117,021-39,202,590
(GRCh37/hg19)

Genomic View for ARHGEF33 Gene

Genes around ARHGEF33 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGEF33 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGEF33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGEF33 Gene

Proteins for ARHGEF33 Gene

  • Protein details for ARHGEF33 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MVX0-ARG33_HUMAN
    Recommended name:
    Rho guanine nucleotide exchange factor 33
    Protein Accession:
    A8MVX0
    Secondary Accessions:
    • J3KPX2

    Protein attributes for ARHGEF33 Gene

    Size:
    844 amino acids
    Molecular mass:
    94633 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=DV080278; Type=Frameshift; Positions=79; Evidence={ECO:0000305};

    Alternative splice isoforms for ARHGEF33 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ARHGEF33 Gene

Post-translational modifications for ARHGEF33 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ARHGEF33 Gene

No data available for DME Specific Peptides for ARHGEF33 Gene

Domains & Families for ARHGEF33 Gene

Gene Families for ARHGEF33 Gene

Protein Domains for ARHGEF33 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ARHGEF33 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ARHGEF33: view

No data available for UniProtKB/Swiss-Prot for ARHGEF33 Gene

Function for ARHGEF33 Gene

Molecular function for ARHGEF33 Gene

UniProtKB/Swiss-Prot Function:
May act as a guanine-nucleotide releasing factor.

Phenotypes From GWAS Catalog for ARHGEF33 Gene

Gene Ontology (GO) - Molecular Function for ARHGEF33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA --
genes like me logo Genes that share ontologies with ARHGEF33: view

Phenotypes for ARHGEF33 Gene

GenomeRNAi human phenotypes for ARHGEF33:
genes like me logo Genes that share phenotypes with ARHGEF33: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ARHGEF33 Gene

Localization for ARHGEF33 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ARHGEF33 gene
Compartment Confidence
nucleus 2
cytosol 2

Subcellular locations from the

Human Protein Atlas (HPA)

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ARHGEF33 Gene

Pathways & Interactions for ARHGEF33 Gene

genes like me logo Genes that share pathways with ARHGEF33: view

Interacting Proteins for ARHGEF33 Gene

Selected Interacting proteins: A8MVX0-ARG33_HUMAN for ARHGEF33 Gene via IID

Symbol External ID(s) Details
CCDC22

Gene Ontology (GO) - Biological Process for ARHGEF33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0035023 regulation of Rho protein signal transduction IEA --
GO:0065009 regulation of molecular function IEA --
genes like me logo Genes that share ontologies with ARHGEF33: view

No data available for SIGNOR curated interactions for ARHGEF33 Gene

Drugs & Compounds for ARHGEF33 Gene

No Compound Related Data Available

Transcripts for ARHGEF33 Gene

mRNA/cDNA for ARHGEF33 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ARHGEF33 Gene

Rho guanine nucleotide exchange factor (GEF) 33:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGEF33 Gene

No ASD Table

Relevant External Links for ARHGEF33 Gene

GeneLoc Exon Structure for
ARHGEF33
ECgene alternative splicing isoforms for
ARHGEF33

Expression for ARHGEF33 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARHGEF33 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ARHGEF33 Gene

This gene is overexpressed in Brain - Cerebellum (x12.1) and Brain - Cerebellar Hemisphere (x5.9).

Protein differential expression in normal tissues from HIPED for ARHGEF33 Gene

This gene is overexpressed in Urine (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ARHGEF33 Gene



Protein tissue co-expression partners for ARHGEF33 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ARHGEF33 Gene:

ARHGEF33

SOURCE GeneReport for Unigene cluster for ARHGEF33 Gene:

Hs.99841

Evidence on tissue expression from TISSUES for ARHGEF33 Gene

  • Nervous system(4.2)
genes like me logo Genes that share expression patterns with ARHGEF33: view

No data available for mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGEF33 Gene

Orthologs for ARHGEF33 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ARHGEF33 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ARHGEF33 33 34
  • 99.73 (n)
dog
(Canis familiaris)
Mammalia ARHGEF33 33 34
  • 93.49 (n)
oppossum
(Monodelphis domestica)
Mammalia ARHGEF33 34
  • 89 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Arhgef33 33 16 34
  • 88.34 (n)
rat
(Rattus norvegicus)
Mammalia Arhgef33 33
  • 86.81 (n)
cow
(Bos Taurus)
Mammalia ARHGEF33 34
  • 86 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 82 (a)
OneToMany
-- 34
  • 56 (a)
OneToMany
chicken
(Gallus gallus)
Aves ARHGEF33 33 34
  • 70.31 (n)
lizard
(Anolis carolinensis)
Reptilia ARHGEF33 34
  • 65 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii ARHGEF33 34
  • 30 (a)
OneToOne
Species where no ortholog for ARHGEF33 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ARHGEF33 Gene

ENSEMBL:
Gene Tree for ARHGEF33 (if available)
TreeFam:
Gene Tree for ARHGEF33 (if available)

Paralogs for ARHGEF33 Gene

No data available for Paralogs for ARHGEF33 Gene

Variants for ARHGEF33 Gene

Sequence variations from dbSNP and Humsavar for ARHGEF33 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000013318 -- 38,933,183(+) G/C intron_variant
rs1000036784 -- 38,949,585(+) A/G intron_variant
rs1000056949 -- 38,922,491(+) T/C intron_variant
rs1000079722 -- 38,967,143(+) C/T intron_variant
rs1000155395 -- 38,939,313(+) G/A intron_variant

Variation tolerance for ARHGEF33 Gene

Gene Damage Index Score: 2.15; 39.10% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ARHGEF33 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGEF33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ARHGEF33 Gene

Disorders for ARHGEF33 Gene

Additional Disease Information for ARHGEF33

No disorders were found for ARHGEF33 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGEF33 Gene

Publications for ARHGEF33 Gene

  1. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier LW … Wilson RK (Nature 2005) 3 4 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
  3. A human interactome in three quantitative dimensions organized by stoichiometries and abundances. (PMID: 26496610) Hein MY … Mann M (Cell 2015) 3 58

Products for ARHGEF33 Gene

Sources for ARHGEF33 Gene

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