Aliases for ARHGEF2-AS1 Gene

Subcategory (RNA class) for ARHGEF2-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ARHGEF2-AS1 Gene

  • ARHGEF2 Antisense RNA 1 2 3
  • Novel Transcript 5
  • NONHSAG003095 92
  • HSALNG0007541 167
  • ARHGEF2-AS1 2
  • Lnc-RXFP4-1 168
  • AL355388.1 5

External Ids for ARHGEF2-AS1 Gene

Summaries for ARHGEF2-AS1 Gene

GeneCards Summary for ARHGEF2-AS1 Gene

ARHGEF2-AS1 (ARHGEF2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ARHGEF2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ARHGEF2-AS1 Gene

Genomics for ARHGEF2-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARHGEF2-AS1 Gene

Promoters and enhancers for ARHGEF2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J155988 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -1.2 -1249 3.5 EP300 CTCF USF1 NCOR1 REST RELA ZBTB25 MYC TGIF2 RAD21 ARHGEF2-AS1 RIT1 ENSG00000273002 lnc-ARHGEF2-1 ARHGEF2
GH01J155937 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.4 -48.2 -48171 10.9 EP300 FOXK2 CTCF TCF12 POLR2G SP1 NCOR1 ZIC2 KDM6A TCF7 RXFP4 CLK2 GON4L KHDC4 RRNAD1 ENSG00000271267 RUSC1-AS1 SHC1 THBS3 FLAD1
GH01J156052 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 10.8 +63.1 63111 4.2 RXRA FOXK2 HNRNPK ZBTB40 ZNF217 EP300 CTCF MYC TCF12 POLR2G UBQLN4 LAMTOR2 LMNA MEX3A ARHGEF2 ARHGEF2-AS1 RXFP4 KHDC4 SEMA4A ASH1L
GH01J155958 Enhancer 1.2 Ensembl ENCODE dbSUPER 12.8 -29.8 -29830 5.3 JUND FOS CTCF ZIC2 EP300 CTBP1 POLR2A DEK MYC NFIC RIT1 ARHGEF2-AS1 ARHGEF2 KHDC4 SCARNA4 UBQLN4 LAMTOR2 ENSG00000273002 SSR2 MIR6738
GH01J156165 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 10.7 +174.0 173987 0.5 RELA BCOR SPI1 KDM1A FOS IKZF1 MLLT1 RELB ARHGEF2 ENSG00000252236 SLC25A44 RIT1 ARHGEF2-AS1 LMNA MEX3A SEMA4A YY1AP1 MEF2D
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ARHGEF2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGEF2-AS1 Gene

Genomic Locations for ARHGEF2-AS1 Gene
chr1:155,991,390-156,001,788
(GRCh38/hg38)
Size:
10,399 bases
Orientation:
Plus strand
chr1:155,961,181-155,971,578
(GRCh37/hg19)
Size:
10,398 bases
Orientation:
Plus strand

Genomic View for ARHGEF2-AS1 Gene

Genes around ARHGEF2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGEF2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGEF2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGEF2-AS1 Gene

Proteins for ARHGEF2-AS1 Gene

Post-translational modifications for ARHGEF2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGEF2-AS1 Gene

Domains & Families for ARHGEF2-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ARHGEF2-AS1 Gene

Function for ARHGEF2-AS1 Gene

Phenotypes From GWAS Catalog for ARHGEF2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGEF2-AS1 Gene

Localization for ARHGEF2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGEF2-AS1 Gene

Pathways & Interactions for ARHGEF2-AS1 Gene

PathCards logo

SuperPathways for ARHGEF2-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ARHGEF2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ARHGEF2-AS1 Gene

Drugs & Compounds for ARHGEF2-AS1 Gene

No Compound Related Data Available

Transcripts for ARHGEF2-AS1 Gene

mRNA/cDNA for ARHGEF2-AS1 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGEF2-AS1 Gene

No ASD Table

Relevant External Links for ARHGEF2-AS1 Gene

GeneLoc Exon Structure for
ARHGEF2-AS1

Expression for ARHGEF2-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGEF2-AS1 Gene

Orthologs for ARHGEF2-AS1 Gene

Evolution for ARHGEF2-AS1 Gene

ENSEMBL:
Gene Tree for ARHGEF2-AS1 (if available)
TreeFam:
Gene Tree for ARHGEF2-AS1 (if available)

No data available for Orthologs for ARHGEF2-AS1 Gene

Paralogs for ARHGEF2-AS1 Gene

No data available for Paralogs for ARHGEF2-AS1 Gene

Variants for ARHGEF2-AS1 Gene

Additional dbSNP identifiers (rs#s) for ARHGEF2-AS1 Gene

Additional Variant Information for ARHGEF2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGEF2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARHGEF2-AS1 Gene

Disorders for ARHGEF2-AS1 Gene

No disorders were found for ARHGEF2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ARHGEF2-AS1 Gene

Publications for ARHGEF2-AS1 Gene

No publications were found for ARHGEF2-AS1 Gene.

No data available for Mastermind for ARHGEF2-AS1 Gene

Products for ARHGEF2-AS1 Gene

Sources for ARHGEF2-AS1 Gene