Aliases for ARHGEF19-AS1 Gene

Subcategory (RNA class) for ARHGEF19-AS1 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ARHGEF19-AS1 Gene

  • ARHGEF19 Antisense RNA 1 2 3 5
  • ARHGEF19 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ARHGEF19-AS1 2 170
  • HSALNG0001153 169
  • NONHSAG000465 94

External Ids for ARHGEF19-AS1 Gene

Previous GeneCards Identifiers for ARHGEF19-AS1 Gene

  • GC00U932963
  • GC01P016525

Summaries for ARHGEF19-AS1 Gene

GeneCards Summary for ARHGEF19-AS1 Gene

ARHGEF19-AS1 (ARHGEF19 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ARHGEF19-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ARHGEF19-AS1 Gene

Genomics for ARHGEF19-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARHGEF19-AS1 Gene

Promoters and enhancers for ARHGEF19-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J016198 Enhancer 0.5 dbSUPER 750.6 +1.5 1535 0.9 PRDM1 ZIC2 ZNF623 BCOR ZNF335 ATF2 ZMYM3 ZNF398 SMARCA5 ARHGEF19-AS1 ARHGEF19 CPLANE2 HSALNG0001155
GH01J016196 Enhancer 0.5 dbSUPER 750.6 -1.1 -1082 0.6 ZNF121 IKZF1 ATF1 ATF2 ATF7 ARHGEF19-AS1 NONHSAG000464.2
GH01J016197 Enhancer 0.3 dbSUPER 750.6 -0.2 -157 0.3 CBFA2T3 ARHGEF19-AS1 ENSG00000228549 NONHSAG000464.2
GH01J016236 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.6 +39.3 39311 2.3 ZBTB40 CTCF ZBTB6 POLR2A CREB1 ELF1 L3MBTL2 MAX DACH1 ZNF121 CPLANE2 HSALNG0001160 ARHGEF19 ARHGEF19-AS1 FAM131C LINC01783 HSALNG0001159
GH01J015791 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.3 -400.2 -400223 11 ZNF24 ZBTB40 CTCF SREBF1 ZBTB6 FOXA1 MLX SMARCE1 RBPJ POLR2A CLCNKA HSPB7 FBLIM1 CD24P1 RNU1-1 CROCC ENSG00000233078 SPEN FAM131C ZBTB17
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ARHGEF19-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGEF19-AS1 Gene

Genomic Locations for ARHGEF19-AS1 Gene
chr1:16,197,854-16,198,357
(GRCh38/hg38)
Size:
504 bases
Orientation:
Plus strand
chr1:16,524,349-16,524,852
(GRCh37/hg19)
Size:
504 bases
Orientation:
Plus strand

Genomic View for ARHGEF19-AS1 Gene

Genes around ARHGEF19-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGEF19-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGEF19-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ARHGEF19-AS1 Gene

Proteins for ARHGEF19-AS1 Gene

Post-translational modifications for ARHGEF19-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGEF19-AS1 Gene

Domains & Families for ARHGEF19-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ARHGEF19-AS1 Gene

Function for ARHGEF19-AS1 Gene

Phenotypes From GWAS Catalog for ARHGEF19-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGEF19-AS1 Gene

Localization for ARHGEF19-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGEF19-AS1 Gene

Pathways & Interactions for ARHGEF19-AS1 Gene

PathCards logo

SuperPathways for ARHGEF19-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ARHGEF19-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGEF19-AS1 Gene

Drugs & Compounds for ARHGEF19-AS1 Gene

No Compound Related Data Available

Transcripts for ARHGEF19-AS1 Gene

mRNA/cDNA for ARHGEF19-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LncBook transcripts :
(1) NONCODE transcripts :
(1) LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGEF19-AS1 Gene

No ASD Table

Relevant External Links for ARHGEF19-AS1 Gene

GeneLoc Exon Structure for
ARHGEF19-AS1
ECgene alternative splicing isoforms for
ARHGEF19-AS1

Expression for ARHGEF19-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARHGEF19-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ARHGEF19-AS1 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x7.7) and Skin - Sun Exposed (Lower leg) (x6.3).
genes like me logo Genes that share expression patterns with ARHGEF19-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGEF19-AS1 Gene

Orthologs for ARHGEF19-AS1 Gene

Evolution for ARHGEF19-AS1 Gene

ENSEMBL:
Gene Tree for ARHGEF19-AS1 (if available)
TreeFam:
Gene Tree for ARHGEF19-AS1 (if available)

No data available for Orthologs for ARHGEF19-AS1 Gene

Paralogs for ARHGEF19-AS1 Gene

No data available for Paralogs for ARHGEF19-AS1 Gene

Variants for ARHGEF19-AS1 Gene

Additional Variant Information for ARHGEF19-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGEF19-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARHGEF19-AS1 Gene

Disorders for ARHGEF19-AS1 Gene

No disorders were found for ARHGEF19-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ARHGEF19-AS1 Gene

Publications for ARHGEF19-AS1 Gene

No publications were found for ARHGEF19-AS1 Gene.

Products for ARHGEF19-AS1 Gene

Sources for ARHGEF19-AS1 Gene