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Aliases for ARHGEF19-AS1 Gene

Subcategory (RNA class) for ARHGEF19-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ARHGEF19-AS1 Gene

  • ARHGEF19 Antisense RNA 1 2 3 5
  • ARHGEF19 Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for ARHGEF19-AS1 Gene

Previous GeneCards Identifiers for ARHGEF19-AS1 Gene

  • GC00U932963
  • GC01P016525

Summaries for ARHGEF19-AS1 Gene

GeneCards Summary for ARHGEF19-AS1 Gene

ARHGEF19-AS1 (ARHGEF19 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ARHGEF19-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGEF19-AS1 Gene

Genomics for ARHGEF19-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARHGEF19-AS1 Gene

Promoters and enhancers for ARHGEF19-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J016198 Enhancer 0.6 dbSUPER 650.7 +1.5 1535 0.9 SMARCA5 BCOR ZNF189 ZMYM3 ZNF398 ATF2 ZIC2 ZNF623 ZNF335 ZNF341 ARHGEF19-AS1 ARHGEF19 CPLANE2 GC01P016210
GH01J016196 Enhancer 0.5 dbSUPER 650.7 -1.1 -1082 0.6 ZNF121 ATF4 ATF1 IKZF1 ATF7 ATF2 ARHGEF19-AS1 GC01P016173
GH01J016197 Enhancer 0.4 dbSUPER 650.7 -0.2 -157 0.3 GATA2 CBFA2T3 ARHGEF19-AS1 TRE-TTC3-1 GC01P016173
GH01J016236 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.6 +39.3 39313 2.3 HDGF SMAD1 ARID4B SIN3A ZNF2 YY1 POLR2B ZNF766 ZNF213 E2F8 CPLANE2 ARHGEF19 NECAP2 ARHGEF19-AS1 FAM131C ZBTB17 LINC01783 GC01M016230
GH01J016161 Enhancer 1.5 Ensembl ENCODE dbSUPER 12.4 -34.0 -33983 4.6 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A FEZF1 ZNF2 E2F8 CROCC CROCCP3 ARHGEF19-AS1 FAM131C ARHGEF19 ENSG00000235241 EPHA2 LINC01772 NBPF1 ZBTB17
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ARHGEF19-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGEF19-AS1 Gene

Genomic Locations for ARHGEF19-AS1 Gene
chr1:16,197,854-16,198,357
(GRCh38/hg38)
Size:
504 bases
Orientation:
Plus strand
chr1:16,524,349-16,524,852
(GRCh37/hg19)
Size:
504 bases
Orientation:
Plus strand

Genomic View for ARHGEF19-AS1 Gene

Genes around ARHGEF19-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGEF19-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGEF19-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ARHGEF19-AS1 Gene

Proteins for ARHGEF19-AS1 Gene

Post-translational modifications for ARHGEF19-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGEF19-AS1 Gene

Domains & Families for ARHGEF19-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGEF19-AS1 Gene

Function for ARHGEF19-AS1 Gene

Phenotypes From GWAS Catalog for ARHGEF19-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGEF19-AS1 Gene

Localization for ARHGEF19-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGEF19-AS1 Gene

Pathways & Interactions for ARHGEF19-AS1 Gene

SuperPathways for ARHGEF19-AS1 Gene

No Data Available

Interacting Proteins for ARHGEF19-AS1 Gene

Gene Ontology (GO) - Biological Process for ARHGEF19-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGEF19-AS1 Gene

Drugs & Compounds for ARHGEF19-AS1 Gene

No Compound Related Data Available

Transcripts for ARHGEF19-AS1 Gene

mRNA/cDNA for ARHGEF19-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGEF19-AS1 Gene

No ASD Table

Relevant External Links for ARHGEF19-AS1 Gene

GeneLoc Exon Structure for
ARHGEF19-AS1
ECgene alternative splicing isoforms for
ARHGEF19-AS1

Expression for ARHGEF19-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARHGEF19-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ARHGEF19-AS1 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x7.7) and Skin - Sun Exposed (Lower leg) (x6.3).
genes like me logo Genes that share expression patterns with ARHGEF19-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGEF19-AS1 Gene

Orthologs for ARHGEF19-AS1 Gene

Evolution for ARHGEF19-AS1 Gene

ENSEMBL:
Gene Tree for ARHGEF19-AS1 (if available)
TreeFam:
Gene Tree for ARHGEF19-AS1 (if available)

No data available for Orthologs for ARHGEF19-AS1 Gene

Paralogs for ARHGEF19-AS1 Gene

No data available for Paralogs for ARHGEF19-AS1 Gene

Variants for ARHGEF19-AS1 Gene

Additional Variant Information for ARHGEF19-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGEF19-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARHGEF19-AS1 Gene

Disorders for ARHGEF19-AS1 Gene

No disorders were found for ARHGEF19-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ARHGEF19-AS1 Gene

Publications for ARHGEF19-AS1 Gene

No publications were found for ARHGEF19-AS1 Gene.

Products for ARHGEF19-AS1 Gene

Sources for ARHGEF19-AS1 Gene

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