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Aliases for ARHGAP27P2 Gene

Subcategory (RNA class) for ARHGAP27P2 Gene

lncRNA

Aliases for ARHGAP27P2 Gene

  • Rho GTPase Activating Protein 27 Pseudogene 2 2 3 5

External Ids for ARHGAP27P2 Gene

ORGUL Members for ARHGAP27P2 Gene

Previous GeneCards Identifiers for ARHGAP27P2 Gene

  • GC17P068225

Summaries for ARHGAP27P2 Gene

GeneCards Summary for ARHGAP27P2 Gene

ARHGAP27P2 (Rho GTPase Activating Protein 27 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for ARHGAP27P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGAP27P2 Gene

Genomics for ARHGAP27P2 Gene

GeneHancer (GH) Regulatory Elements for ARHGAP27P2 Gene

Promoters and enhancers for ARHGAP27P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J068195 Enhancer 1 Ensembl ENCODE 679.1 -0.7 -742 4.5 NFIB MZF1 SIN3A ZNF335 GLIS2 ZNF366 RCOR1 EGR2 SMARCA5 ZNF174 ARHGAP27P2 BPTF ENSG00000267731
GH17J068204 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 26.8 +7.7 7719 3.2 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF213 ZNF207 ZNF143 AMZ2 ENSG00000274712 GC17P068236 NOL11 HELZ ARHGAP27P2 BPTF WIPI1 LOC100418928 ENSG00000267731
GH17J068180 Enhancer 1 Ensembl ENCODE 26.6 -15.2 -15160 6.5 PKNOX1 SMAD1 RB1 MZF1 IKZF2 RUNX3 SMAD5 CBFB NFYC ZEB2 ARHGAP27P2 BPTF ENSG00000267731 NOL11 HELZ WIPI1 MIR635 AMZ2 ENSG00000278740 PIR57829
GH17J068200 Enhancer 1.2 Ensembl ENCODE 19.2 +2.2 2226 1.5 PKNOX1 MLX ARID4B SIN3A FEZF1 ZNF2 ZNF48 GLIS2 ELK1 ZNF143 ARHGAP27P2 ENSG00000265100 ENSG00000267731 ENSG00000274712
GH17J067992 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 6.9 -203.9 -203866 4.5 CLOCK ZFP64 YBX1 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 ZNF610 C17orf58 NOL11 HELZ BPTF LRRC37A16P ENSG00000267731 ENSG00000265100 WIPI1 ARHGAP27P2 AMZ2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ARHGAP27P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGAP27P2 Gene

Genomic Locations for ARHGAP27P2 Gene
chr17:68,198,660-68,200,302
(GRCh38/hg38)
Size:
1,643 bases
Orientation:
Plus strand
chr17:66,194,801-66,196,443
(GRCh37/hg19)
Size:
1,643 bases
Orientation:
Plus strand

Genomic View for ARHGAP27P2 Gene

Genes around ARHGAP27P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGAP27P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGAP27P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGAP27P2 Gene

Proteins for ARHGAP27P2 Gene

Post-translational modifications for ARHGAP27P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGAP27P2 Gene

Domains & Families for ARHGAP27P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGAP27P2 Gene

Function for ARHGAP27P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGAP27P2 Gene

Localization for ARHGAP27P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGAP27P2 Gene

Pathways & Interactions for ARHGAP27P2 Gene

SuperPathways for ARHGAP27P2 Gene

No Data Available

Interacting Proteins for ARHGAP27P2 Gene

Gene Ontology (GO) - Biological Process for ARHGAP27P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGAP27P2 Gene

Drugs & Compounds for ARHGAP27P2 Gene

No Compound Related Data Available

Transcripts for ARHGAP27P2 Gene

mRNA/cDNA for ARHGAP27P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGAP27P2 Gene

No ASD Table

Relevant External Links for ARHGAP27P2 Gene

GeneLoc Exon Structure for
ARHGAP27P2
ECgene alternative splicing isoforms for
ARHGAP27P2

Expression for ARHGAP27P2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGAP27P2 Gene

Orthologs for ARHGAP27P2 Gene

Evolution for ARHGAP27P2 Gene

ENSEMBL:
Gene Tree for ARHGAP27P2 (if available)
TreeFam:
Gene Tree for ARHGAP27P2 (if available)

No data available for Orthologs for ARHGAP27P2 Gene

Paralogs for ARHGAP27P2 Gene

No data available for Paralogs for ARHGAP27P2 Gene

Variants for ARHGAP27P2 Gene

Sequence variations from dbSNP and Humsavar for ARHGAP27P2 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs112735696 -- 68,197,194(+) C/A upstream_transcript_variant
rs113667820 -- 68,198,547(+) G/A upstream_transcript_variant
rs116304810 -- 68,200,177(+) G/A non_coding_transcript_variant
rs117445625 -- 68,196,764(+) G/A upstream_transcript_variant
rs12452035 -- 68,200,610(+) A/G downstream_transcript_variant

Additional Variant Information for ARHGAP27P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGAP27P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARHGAP27P2 Gene

Disorders for ARHGAP27P2 Gene

No disorders were found for ARHGAP27P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ARHGAP27P2 Gene

Publications for ARHGAP27P2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ARHGAP27P2 Gene

Sources for ARHGAP27P2 Gene

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