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Aliases for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Aliases for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

  • ARHGAP27P1-BPTFP1-KPNA2P3 Readthrough, Transcribed Pseudogene 2 3 5

External Ids for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Summaries for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Entrez Gene Summary for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

  • This locus represents naturally-occurring readthrough transcription between multiple unprocessed pseudogene loci. Readthrough transcripts likely do not encode functional proteins. [provided by RefSeq, Dec 2016]

GeneCards Summary for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

ARHGAP27P1-BPTFP1-KPNA2P3 (ARHGAP27P1-BPTFP1-KPNA2P3 Readthrough, Transcribed Pseudogene) is a Pseudogene.

Additional gene information for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Genomics for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

GeneHancer (GH) Regulatory Elements for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Promoters and enhancers for ARHGAP27P1-BPTFP1-KPNA2P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I064779 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 568.5 +0.7 697 3 PKNOX1 SIN3A ZNF76 ZBTB7B ZBTB40 RFX5 ZNF335 GLIS2 ELK1 E2F8 ARHGAP27P1-BPTFP1-KPNA2P3 ARHGAP27P1 MIR6080 LOC101929240 PLEKHM1P1
GH17I064808 Enhancer 1.3 Ensembl ENCODE dbSUPER 19.8 -27.2 -27194 1.8 HDGF PKNOX1 FOXA2 ARID4B NEUROD1 SIN3A ZBTB7B GLIS2 ATF7 FOS ARHGAP27P1-BPTFP1-KPNA2P3 GC17M064817 ARHGAP27P1 PLEKHM1P1
GH17I064792 Enhancer 0.9 Ensembl ENCODE dbSUPER 19.2 -11.9 -11871 2.1 ZFHX2 EGR1 IKZF1 CBFA2T3 EGR2 ARHGAP27P1-BPTFP1-KPNA2P3 LOC101929240 ARHGAP27P1 GC17M064817 PLEKHM1P1
GH17I064815 Enhancer 0.9 ENCODE dbSUPER 14.1 -34.0 -34042 1.4 HDGF NCOA3 CLOCK NFIB SIN3A PAX8 MTA3 CTBP1 RCOR1 SMARCA5 GC17M064817 ARHGAP27P1-BPTFP1-KPNA2P3 PLEKHM1P1 ARHGAP27P1
GH17I064794 Enhancer 0.6 dbSUPER 19.1 -14.0 -14000 1.6 NEUROD1 GATAD2B ZEB2 ZEB1 SP1 ZFHX2 ZNF512B TARDBP ZNF8 ZNF444 ARHGAP27P1-BPTFP1-KPNA2P3 ARHGAP27P1 GC17M064817 PLEKHM1P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ARHGAP27P1-BPTFP1-KPNA2P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Genomic Locations for ARHGAP27P1-BPTFP1-KPNA2P3 Gene
chr17:64,749,663-64,781,707
(GRCh38/hg38)
Size:
32,045 bases
Orientation:
Minus strand

Genomic View for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Genes around ARHGAP27P1-BPTFP1-KPNA2P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGAP27P1-BPTFP1-KPNA2P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGAP27P1-BPTFP1-KPNA2P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Proteins for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Post-translational modifications for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Domains & Families for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Function for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Localization for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Pathways & Interactions for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

SuperPathways for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

No Data Available

Interacting Proteins for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Gene Ontology (GO) - Biological Process for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Drugs & Compounds for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

No Compound Related Data Available

Transcripts for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

mRNA/cDNA for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

No ASD Table

Relevant External Links for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

GeneLoc Exon Structure for
ARHGAP27P1-BPTFP1-KPNA2P3
ECgene alternative splicing isoforms for
ARHGAP27P1-BPTFP1-KPNA2P3

Expression for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Orthologs for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Evolution for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

ENSEMBL:
Gene Tree for ARHGAP27P1-BPTFP1-KPNA2P3 (if available)
TreeFam:
Gene Tree for ARHGAP27P1-BPTFP1-KPNA2P3 (if available)

No data available for Orthologs for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Paralogs for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

No data available for Paralogs for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Variants for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Additional Variant Information for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGAP27P1-BPTFP1-KPNA2P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Disorders for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Additional Disease Information for ARHGAP27P1-BPTFP1-KPNA2P3

No disorders were found for ARHGAP27P1-BPTFP1-KPNA2P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Publications for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

Sources for ARHGAP27P1-BPTFP1-KPNA2P3 Gene

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