Aliases for ARHGAP26-AS1 Gene

Subcategory (RNA class) for ARHGAP26-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ARHGAP26-AS1 Gene

  • ARHGAP26 Antisense RNA 1 2 3 5
  • ARHGAP26 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ARHGAP26-AS1 2 168
  • NONHSAG041808 92
  • HSALNG0045520 167

External Ids for ARHGAP26-AS1 Gene

Previous GeneCards Identifiers for ARHGAP26-AS1 Gene

  • GC00U933414
  • GC05M142240

Summaries for ARHGAP26-AS1 Gene

GeneCards Summary for ARHGAP26-AS1 Gene

ARHGAP26-AS1 (ARHGAP26 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ARHGAP26-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ARHGAP26-AS1 Gene

Genomics for ARHGAP26-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARHGAP26-AS1 Gene

Promoters and enhancers for ARHGAP26-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J142842 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 12.7 +22.6 22591 12.6 NR2F2 NCOR1 ZNF316 NFIC GABPA TRIM24 SPI1 NFE2 FOSL1 TAL1 lnc-FGF1-5 ARHGAP26-AS1 ARHGAP26
GH05J142712 Promoter/Enhancer 1.3 ENCODE CraniofacialAtlas 11.7 +158.1 158119 2 ZNF217 CTCF TCF12 TEAD4 ZNF639 ZBTB10 ZNF423 ZBTB26 TRIM28 TARDBP LINC01844 lnc-FGF1-3 ARHGAP26-AS1
GH05J142805 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 11.8 +63.0 63048 4.5 EP300 FOXK2 NCOR1 KDM6A TCF7 FOXA1 TRIM28 ZBTB25 TGIF2 ZBTB7A ARHGAP26-AS1 ARHGAP26 lnc-FGF1-5
GH05J142794 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 12 +71.2 71205 11 TCF12 TCF7 CTCF TBX3 NR2F2 FOXA2 MAFF SRF POLR2A SPI1 ARHGAP26 ARHGAP26-AS1 lnc-FGF1-5
GH05J142815 Enhancer 1.2 ENCODE dbSUPER 12.3 +47.0 46995 17.2 ZSCAN5C TCF12 POLR2G USF1 NCOR1 JUND FOS ZNF639 ZNF10 ZIC2 DELE1 ARHGAP26-AS1 ENSG00000271871 lnc-FGF1-5 ARHGAP26
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ARHGAP26-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGAP26-AS1 Gene

Genomic Locations for ARHGAP26-AS1 Gene
chr5:142,859,604-142,871,273
(GRCh38/hg38)
Size:
11,670 bases
Orientation:
Minus strand
chr5:142,239,169-142,248,487
(GRCh37/hg19)
Size:
9,319 bases
Orientation:
Minus strand

Genomic View for ARHGAP26-AS1 Gene

Genes around ARHGAP26-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGAP26-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGAP26-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGAP26-AS1 Gene

Proteins for ARHGAP26-AS1 Gene

Post-translational modifications for ARHGAP26-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGAP26-AS1 Gene

Domains & Families for ARHGAP26-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ARHGAP26-AS1 Gene

Function for ARHGAP26-AS1 Gene

Phenotypes From GWAS Catalog for ARHGAP26-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGAP26-AS1 Gene

Localization for ARHGAP26-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGAP26-AS1 Gene

Pathways & Interactions for ARHGAP26-AS1 Gene

PathCards logo

SuperPathways for ARHGAP26-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ARHGAP26-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ARHGAP26-AS1 Gene

Drugs & Compounds for ARHGAP26-AS1 Gene

No Compound Related Data Available

Transcripts for ARHGAP26-AS1 Gene

mRNA/cDNA for ARHGAP26-AS1 Gene

8 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
7 NONCODE transcripts :
5 LncBook transcripts :
6 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGAP26-AS1 Gene

No ASD Table

Relevant External Links for ARHGAP26-AS1 Gene

GeneLoc Exon Structure for
ARHGAP26-AS1

Expression for ARHGAP26-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ARHGAP26-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ARHGAP26-AS1 Gene

This gene is overexpressed in Testis (x47.0).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ARHGAP26-AS1

SOURCE GeneReport for Unigene cluster for ARHGAP26-AS1 Gene:

Hs.570896
genes like me logo Genes that share expression patterns with ARHGAP26-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGAP26-AS1 Gene

Orthologs for ARHGAP26-AS1 Gene

Evolution for ARHGAP26-AS1 Gene

ENSEMBL:
Gene Tree for ARHGAP26-AS1 (if available)
TreeFam:
Gene Tree for ARHGAP26-AS1 (if available)

No data available for Orthologs for ARHGAP26-AS1 Gene

Paralogs for ARHGAP26-AS1 Gene

No data available for Paralogs for ARHGAP26-AS1 Gene

Variants for ARHGAP26-AS1 Gene

Additional dbSNP identifiers (rs#s) for ARHGAP26-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for ARHGAP26-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3606999 CNV gain 21293372
esv3607010 CNV loss 21293372
esv3607011 CNV gain 21293372
nsv1031126 CNV gain 25217958

Additional Variant Information for ARHGAP26-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGAP26-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for ARHGAP26-AS1 Gene

Disorders for ARHGAP26-AS1 Gene

Additional Disease Information for ARHGAP26-AS1

No disorders were found for ARHGAP26-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGAP26-AS1 Gene

Publications for ARHGAP26-AS1 Gene

No publications were found for ARHGAP26-AS1 Gene.

Products for ARHGAP26-AS1 Gene

Sources for ARHGAP26-AS1 Gene