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Aliases for ARHGAP26-AS1 Gene

Subcategory (RNA class) for ARHGAP26-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ARHGAP26-AS1 Gene

  • ARHGAP26 Antisense RNA 1 2 3 5
  • ARHGAP26 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ARHGAP26-AS1 Gene

Previous GeneCards Identifiers for ARHGAP26-AS1 Gene

  • GC00U933414
  • GC05M142240

Summaries for ARHGAP26-AS1 Gene

GeneCards Summary for ARHGAP26-AS1 Gene

ARHGAP26-AS1 (ARHGAP26 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ARHGAP26-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGAP26-AS1 Gene

Genomics for ARHGAP26-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARHGAP26-AS1 Gene

Promoters and enhancers for ARHGAP26-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I142866 Enhancer 1.3 Ensembl ENCODE dbSUPER 550.8 +1.7 1707 1.7 HDGF ELF3 PKNOX1 FOXA2 ZSCAN4 ARID4B ZNF2 RAD21 ZNF335 ZNF143 ARHGAP26-AS1 GC05P142852 GC05P142853 ARHGAP26
GH05I142794 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 12.1 +68.9 68854 11 FOXA2 ZSCAN4 SIN3A ZNF121 IKZF2 CREM RUNX3 REST NR2F2 SREBF1 ARHGAP26 ARHGAP26-AS1 GC05P142826 GC05P142827
GH05I142815 Enhancer 1.4 Ensembl ENCODE dbSUPER 12.3 +44.6 44644 17.2 PKNOX1 FOXA2 MLX ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF548 FOS KIAA0141 ENSG00000271871 ARHGAP26-AS1 GC05P142826 GC05P142827 ARHGAP26
GH05I142805 Enhancer 1.4 Ensembl ENCODE dbSUPER 11.8 +58.3 58341 9.2 FOXA2 MLX ARID4B FEZF1 DMAP1 ZNF48 ETS1 YY1 TCF12 SLC30A9 ARHGAP26-AS1 GC05P142826 GC05P142827 ARHGAP26
GH05I142839 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 12.1 +28.2 28150 2.8 KLF1 BMI1 ZNF366 POLR2A VEZF1 RCOR1 CHD2 RFX1 CEBPB KLF4 ARHGAP26-AS1 ARHGAP26 GC05P142826 GC05P142827 GC05P142852 GC05P142853
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ARHGAP26-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGAP26-AS1 Gene

Genomic Locations for ARHGAP26-AS1 Gene
chr5:142,859,604-142,868,922
(GRCh38/hg38)
Size:
9,319 bases
Orientation:
Minus strand
chr5:142,239,169-142,248,487
(GRCh37/hg19)

Genomic View for ARHGAP26-AS1 Gene

Genes around ARHGAP26-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGAP26-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGAP26-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGAP26-AS1 Gene

Proteins for ARHGAP26-AS1 Gene

Post-translational modifications for ARHGAP26-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGAP26-AS1 Gene

Domains & Families for ARHGAP26-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGAP26-AS1 Gene

Function for ARHGAP26-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGAP26-AS1 Gene

Localization for ARHGAP26-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGAP26-AS1 Gene

Pathways & Interactions for ARHGAP26-AS1 Gene

SuperPathways for ARHGAP26-AS1 Gene

No Data Available

Interacting Proteins for ARHGAP26-AS1 Gene

Gene Ontology (GO) - Biological Process for ARHGAP26-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGAP26-AS1 Gene

Drugs & Compounds for ARHGAP26-AS1 Gene

No Compound Related Data Available

Transcripts for ARHGAP26-AS1 Gene

mRNA/cDNA for ARHGAP26-AS1 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ARHGAP26-AS1 Gene

ARHGAP26 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGAP26-AS1 Gene

No ASD Table

Relevant External Links for ARHGAP26-AS1 Gene

GeneLoc Exon Structure for
ARHGAP26-AS1
ECgene alternative splicing isoforms for
ARHGAP26-AS1

Expression for ARHGAP26-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARHGAP26-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ARHGAP26-AS1 Gene

This gene is overexpressed in Testis (x47.0).

SOURCE GeneReport for Unigene cluster for ARHGAP26-AS1 Gene:

Hs.570896
genes like me logo Genes that share expression patterns with ARHGAP26-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGAP26-AS1 Gene

Orthologs for ARHGAP26-AS1 Gene

Evolution for ARHGAP26-AS1 Gene

ENSEMBL:
Gene Tree for ARHGAP26-AS1 (if available)
TreeFam:
Gene Tree for ARHGAP26-AS1 (if available)

No data available for Orthologs for ARHGAP26-AS1 Gene

Paralogs for ARHGAP26-AS1 Gene

No data available for Paralogs for ARHGAP26-AS1 Gene

Variants for ARHGAP26-AS1 Gene

Sequence variations from dbSNP and Humsavar for ARHGAP26-AS1 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000214004 -- 142,866,852(-) G/T non_coding_transcript_variant
rs1000364677 -- 142,864,745(-) T/A intron_variant
rs1000567488 -- 142,864,995(-) C/T intron_variant
rs1000658083 -- 142,869,201(-) C/T upstream_transcript_variant
rs1000804831 -- 142,865,363(-) T/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ARHGAP26-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3606999 CNV gain 21293372
esv3607010 CNV loss 21293372
esv3607011 CNV gain 21293372
nsv1031126 CNV gain 25217958

Additional Variant Information for ARHGAP26-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGAP26-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ARHGAP26-AS1 Gene

Disorders for ARHGAP26-AS1 Gene

Additional Disease Information for ARHGAP26-AS1

No disorders were found for ARHGAP26-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGAP26-AS1 Gene

Publications for ARHGAP26-AS1 Gene

No publications were found for ARHGAP26-AS1 Gene.

Products for ARHGAP26-AS1 Gene

Sources for ARHGAP26-AS1 Gene

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