Aliases for ARHGAP15-AS1 Gene

Subcategory (RNA class) for ARHGAP15-AS1 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for ARHGAP15-AS1 Gene

  • ARHGAP15 Antisense RNA 1 2 3
  • CTD-2252P21.1 3

External Ids for ARHGAP15-AS1 Gene

Summaries for ARHGAP15-AS1 Gene

GeneCards Summary for ARHGAP15-AS1 Gene

ARHGAP15-AS1 (ARHGAP15 Antisense RNA 1) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for ARHGAP15-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ARHGAP15-AS1 Gene

Genomics for ARHGAP15-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARHGAP15-AS1 Gene

Promoters and enhancers for ARHGAP15-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J143720 Enhancer 0.4 ENCODE 750.6 -0.9 -857 0.2 CTCF ZKSCAN8 NR2F1 ARHGAP15-AS1 lnc-GTDC1-13 lnc-KYNU-11 ENSG00000257277 ARHGAP15
GH02J143719 Enhancer 0.3 Ensembl 750.6 +0.1 129 0.2 ZNF316 MAFK ARHGAP15-AS1 lnc-GTDC1-13 lnc-KYNU-11 ENSG00000257277 lnc-GTDC1-27-002 ARHGAP15
GH02J143718 Enhancer 0.2 FANTOM5 750.6 +0.6 643 0.3 ARHGAP15-AS1 ENSG00000257277 lnc-GTDC1-27-002 ARHGAP15
GH02J143691 Enhancer 1.1 UCNEbase Ensembl 0.3 +28.1 28129 11 CTCF ETV6 RAD21 TEAD4 ZNF384 MAFK CBFA2T2 SMARCA4 CREM TRIM24 LOC101928386 lnc-GTDC1-27-002 ARHGAP15-AS1 ENSG00000257277 ARHGAP15
GH02J143684 Enhancer 1.2 UCNEbase Ensembl ENCODE CraniofacialAtlas 0.3 +34.5 34547 1.8 MAFK PKNOX1 POLR2A ZNF316 SCRT2 RCOR1 lnc-GTDC1-27-002 ARHGAP15-AS1 ENSG00000257277 ARHGAP15
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ARHGAP15-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGAP15-AS1 Gene

Genomic Locations for ARHGAP15-AS1 Gene
chr2:143,628,243-143,719,630
(GRCh38/hg38)
Size:
91,388 bases
Orientation:
Minus strand

Genomic View for ARHGAP15-AS1 Gene

Genes around ARHGAP15-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGAP15-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGAP15-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGAP15-AS1 Gene

Proteins for ARHGAP15-AS1 Gene

Post-translational modifications for ARHGAP15-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGAP15-AS1 Gene

Domains & Families for ARHGAP15-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ARHGAP15-AS1 Gene

Function for ARHGAP15-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGAP15-AS1 Gene

Localization for ARHGAP15-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGAP15-AS1 Gene

Pathways & Interactions for ARHGAP15-AS1 Gene

PathCards logo

SuperPathways for ARHGAP15-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ARHGAP15-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGAP15-AS1 Gene

Drugs & Compounds for ARHGAP15-AS1 Gene

No Compound Related Data Available

Transcripts for ARHGAP15-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGAP15-AS1 Gene

No ASD Table

Relevant External Links for ARHGAP15-AS1 Gene

GeneLoc Exon Structure for
ARHGAP15-AS1
ECgene alternative splicing isoforms for
ARHGAP15-AS1

No data available for mRNA/cDNA for ARHGAP15-AS1 Gene

Expression for ARHGAP15-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGAP15-AS1 Gene

Orthologs for ARHGAP15-AS1 Gene

No data available for Orthologs and Evolution for ARHGAP15-AS1 Gene

Paralogs for ARHGAP15-AS1 Gene

No data available for Paralogs for ARHGAP15-AS1 Gene

Variants for ARHGAP15-AS1 Gene

Sequence variations from dbSNP and Humsavar for ARHGAP15-AS1 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000005137 -- 143,664,439(-) G/C genic_upstream_transcript_variant, intron_variant
rs1000030846 -- 143,698,021(-) T/A genic_upstream_transcript_variant, intron_variant
rs1000045267 -- 143,727,139(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000051461 -- 143,687,033(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000088059 -- 143,749,918(-) C/G genic_upstream_transcript_variant, intron_variant

Additional Variant Information for ARHGAP15-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGAP15-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARHGAP15-AS1 Gene

Disorders for ARHGAP15-AS1 Gene

No disorders were found for ARHGAP15-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ARHGAP15-AS1 Gene

Publications for ARHGAP15-AS1 Gene

No publications were found for ARHGAP15-AS1 Gene.

No data available for External Links for ARHGAP15-AS1 Gene

Products for ARHGAP15-AS1 Gene

Sources for ARHGAP15-AS1 Gene