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Aliases for ARF4-AS1 Gene

Subcategory (RNA class) for ARF4-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ARF4-AS1 Gene

  • ARF4 Antisense RNA 1 2 3 5

External Ids for ARF4-AS1 Gene

Previous GeneCards Identifiers for ARF4-AS1 Gene

  • GC00U936446

Summaries for ARF4-AS1 Gene

GeneCards Summary for ARF4-AS1 Gene

ARF4-AS1 (ARF4 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ARF4-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARF4-AS1 Gene

Genomics for ARF4-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARF4-AS1 Gene

Promoters and enhancers for ARF4-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J057594 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 650.7 -0.1 -144 6 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC MEF2D GLIS1 NBN ARF4 ARF4-AS1 GC03P057599 DENND6A FAM208A DENND6A-AS1 PDE12 DENND6A-DT APPL1 HESX1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ARF4-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARF4-AS1 Gene

Genomic Locations for ARF4-AS1 Gene
chr3:57,597,715-57,600,927
(GRCh38/hg38)
Size:
3,213 bases
Orientation:
Plus strand
chr3:57,583,442-57,586,654
(GRCh37/hg19)
Size:
3,213 bases
Orientation:
Plus strand

Genomic View for ARF4-AS1 Gene

Genes around ARF4-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARF4-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARF4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARF4-AS1 Gene

Function for ARF4-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARF4-AS1 Gene

Localization for ARF4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARF4-AS1 Gene

Pathways & Interactions for ARF4-AS1 Gene

SuperPathways for ARF4-AS1 Gene

No Data Available

Interacting Proteins for ARF4-AS1 Gene

Gene Ontology (GO) - Biological Process for ARF4-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARF4-AS1 Gene

Drugs & Compounds for ARF4-AS1 Gene

No Compound Related Data Available

Transcripts for ARF4-AS1 Gene

mRNA/cDNA for ARF4-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(5) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ARF4-AS1 Gene

No ASD Table

Relevant External Links for ARF4-AS1 Gene

GeneLoc Exon Structure for
ARF4-AS1
ECgene alternative splicing isoforms for
ARF4-AS1

Expression for ARF4-AS1 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARF4-AS1 Gene

Orthologs for ARF4-AS1 Gene

Evolution for ARF4-AS1 Gene

ENSEMBL:
Gene Tree for ARF4-AS1 (if available)
TreeFam:
Gene Tree for ARF4-AS1 (if available)

No data available for Orthologs for ARF4-AS1 Gene

Paralogs for ARF4-AS1 Gene

No data available for Paralogs for ARF4-AS1 Gene

Variants for ARF4-AS1 Gene

Sequence variations from dbSNP and Humsavar for ARF4-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000178729 -- 57,596,438(+) C/T upstream_transcript_variant
rs1001470837 -- 57,601,036(+) A/C downstream_transcript_variant
rs1002037413 -- 57,595,843(+) C/T upstream_transcript_variant
rs1002185449 -- 57,597,868(+) C/T non_coding_transcript_variant
rs1002483627 -- 57,599,570(+) G/A intron_variant

Additional Variant Information for ARF4-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARF4-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARF4-AS1 Gene

Disorders for ARF4-AS1 Gene

Additional Disease Information for ARF4-AS1

No disorders were found for ARF4-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARF4-AS1 Gene

Publications for ARF4-AS1 Gene

No publications were found for ARF4-AS1 Gene.

Products for ARF4-AS1 Gene

Sources for ARF4-AS1 Gene

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