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Aliases for ARAP1-AS1 Gene

Subcategory (RNA class) for ARAP1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ARAP1-AS1 Gene

  • ARAP1 Antisense RNA 1 2 3 5
  • ARAP1 Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for ARAP1-AS1 Gene

Previous GeneCards Identifiers for ARAP1-AS1 Gene

  • GC00U933313
  • GC11P072397

Summaries for ARAP1-AS1 Gene

GeneCards Summary for ARAP1-AS1 Gene

ARAP1-AS1 (ARAP1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ARAP1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARAP1-AS1 Gene

Genomics for ARAP1-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARAP1-AS1 Gene

Promoters and enhancers for ARAP1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J072684 Enhancer 1 ENCODE dbSUPER 650.7 -0.7 -660 1.3 HDGF RB1 SIN3A RAD21 GLIS2 ZNF143 RUNX3 CREM DEK EGR2 ARAP1-AS1 STARD10 ARAP1 PDE2A
GH11J072683 Enhancer 0.8 ENCODE dbSUPER 650.7 -1.4 -1386 0.1 CTCF ZNF654 MAZ RB1 TRIM22 SIN3A REST RUNX1 POLR2A MYNN ARAP1-AS1 STARD10 PDE2A
GH11J072685 Enhancer 0.4 ENCODE dbSUPER 650.7 +0.5 546 0 ARAP1-AS1 ARAP1-AS2 ARAP1
GH11J072686 Enhancer 0.4 ENCODE dbSUPER 650.7 +1.4 1363 1.4 ARAP1-AS1 ARAP1 PDE2A ARAP1-AS2
GH11J072811 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.3 +129.1 129135 5.5 HDGF PKNOX1 CLOCK FOXA2 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A ATG16L2 STARD10 ALG1L9P NUMA1 LOC100128494 LOC105369379 ENSG00000255672 ENSG00000256739 LOC220077 LOC401703
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ARAP1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARAP1-AS1 Gene

Genomic Locations for ARAP1-AS1 Gene
chr11:72,685,075-72,693,808
(GRCh38/hg38)
Size:
8,734 bases
Orientation:
Plus strand
chr11:72,396,120-72,404,853
(GRCh37/hg19)

Genomic View for ARAP1-AS1 Gene

Genes around ARAP1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARAP1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARAP1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ARAP1-AS1 Gene

Proteins for ARAP1-AS1 Gene

Post-translational modifications for ARAP1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARAP1-AS1 Gene

Domains & Families for ARAP1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARAP1-AS1 Gene

Function for ARAP1-AS1 Gene

Phenotypes From GWAS Catalog for ARAP1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARAP1-AS1 Gene

Localization for ARAP1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARAP1-AS1 Gene

Pathways & Interactions for ARAP1-AS1 Gene

SuperPathways for ARAP1-AS1 Gene

No Data Available

Interacting Proteins for ARAP1-AS1 Gene

Gene Ontology (GO) - Biological Process for ARAP1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARAP1-AS1 Gene

Drugs & Compounds for ARAP1-AS1 Gene

No Compound Related Data Available

Transcripts for ARAP1-AS1 Gene

mRNA/cDNA for ARAP1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARAP1-AS1 Gene

No ASD Table

Relevant External Links for ARAP1-AS1 Gene

GeneLoc Exon Structure for
ARAP1-AS1
ECgene alternative splicing isoforms for
ARAP1-AS1

Expression for ARAP1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARAP1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ARAP1-AS1 Gene

This gene is overexpressed in Whole Blood (x8.5).
genes like me logo Genes that share expression patterns with ARAP1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARAP1-AS1 Gene

Orthologs for ARAP1-AS1 Gene

Evolution for ARAP1-AS1 Gene

ENSEMBL:
Gene Tree for ARAP1-AS1 (if available)
TreeFam:
Gene Tree for ARAP1-AS1 (if available)

No data available for Orthologs for ARAP1-AS1 Gene

Paralogs for ARAP1-AS1 Gene

No data available for Paralogs for ARAP1-AS1 Gene

Variants for ARAP1-AS1 Gene

Additional Variant Information for ARAP1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARAP1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARAP1-AS1 Gene

Disorders for ARAP1-AS1 Gene

No disorders were found for ARAP1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ARAP1-AS1 Gene

Publications for ARAP1-AS1 Gene

No publications were found for ARAP1-AS1 Gene.

Products for ARAP1-AS1 Gene

Sources for ARAP1-AS1 Gene

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