Aliases for ARAP1-AS1 Gene

Subcategory (RNA class) for ARAP1-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ARAP1-AS1 Gene

  • ARAP1 Antisense RNA 1 2 3 5
  • ARAP1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ARAP1-AS1 2 5
  • NONHSAG008992.2 91
  • HSALNG0085574 164

External Ids for ARAP1-AS1 Gene

Previous GeneCards Identifiers for ARAP1-AS1 Gene

  • GC00U933313
  • GC11P072397

Summaries for ARAP1-AS1 Gene

GeneCards Summary for ARAP1-AS1 Gene

ARAP1-AS1 (ARAP1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ARAP1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ARAP1-AS1 Gene

Genomics for ARAP1-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ARAP1-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ARAP1-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ARAP1-AS1 Gene

Genomic Locations for ARAP1-AS1 Gene
chr11:72,685,075-72,693,808
(GRCh38/hg38)
Size:
8,734 bases
Orientation:
Plus strand
chr11:72,396,120-72,404,853
(GRCh37/hg19)
Size:
8,734 bases
Orientation:
Plus strand

Genomic View for ARAP1-AS1 Gene

Genes around ARAP1-AS1 on UCSC Golden Path with GeneCards custom track
ARAP1-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ARAP1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARAP1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ARAP1-AS1 Gene

Proteins for ARAP1-AS1 Gene

Post-translational modifications for ARAP1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARAP1-AS1 Gene

Domains & Families for ARAP1-AS1 Gene

Gene Families for ARAP1-AS1 Gene

genes like me logo Genes that share domains with ARAP1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ARAP1-AS1 Gene

Function for ARAP1-AS1 Gene

Phenotypes From GWAS Catalog for ARAP1-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARAP1-AS1 Gene

Localization for ARAP1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARAP1-AS1 Gene

Pathways & Interactions for ARAP1-AS1 Gene

PathCards logo

SuperPathways for ARAP1-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ARAP1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ARAP1-AS1 Gene

Drugs & Compounds for ARAP1-AS1 Gene

No Compound Related Data Available

Transcripts for ARAP1-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ARAP1-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000379690_9606 lncRNA 388 4

HGNC: 39993,

Ensembl: ENST00000542022 (view in UCSC) ,

LncBook: HSALNT0178008,

NONCODE: NONHSAT022785.2,

ARAP1-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARAP1-AS1 Gene

No ASD Table

Relevant External Links for ARAP1-AS1 Gene

GeneLoc Exon Structure for
ARAP1-AS1

No data available for mRNA/cDNA for ARAP1-AS1 Gene

Expression for ARAP1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ARAP1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ARAP1-AS1 Gene

This gene is overexpressed in Whole Blood (x8.5).
genes like me logo Genes that share expression patterns with ARAP1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARAP1-AS1 Gene

Orthologs for ARAP1-AS1 Gene

Evolution for ARAP1-AS1 Gene

ENSEMBL:
Gene Tree for ARAP1-AS1 (if available)
TreeFam:
Gene Tree for ARAP1-AS1 (if available)

No data available for Orthologs for ARAP1-AS1 Gene

Paralogs for ARAP1-AS1 Gene

No data available for Paralogs for ARAP1-AS1 Gene

Variants for ARAP1-AS1 Gene

Additional Variant Information for ARAP1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARAP1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARAP1-AS1 Gene

Disorders for ARAP1-AS1 Gene

No disorders were found for ARAP1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ARAP1-AS1 Gene

Publications for ARAP1-AS1 Gene

  1. YY1-Induced Upregulation of Long Noncoding RNA ARAP1-AS1 Promotes Cell Migration and Invasion in Colorectal Cancer Through the Wnt/β-Catenin Signaling Pathway. (PMID: 31173500) Ye Y … Huang W (Cancer biotherapy & radiopharmaceuticals 2019) 2 3
  2. Analysis of circulating lncRNA expression profiles in patients with diabetes mellitus and diabetic nephropathy: Differential expression profile of circulating lncRNA
. (PMID: 31079598) Yang Y … Chen T (Clinical nephrology 2019) 3

Products for ARAP1-AS1 Gene

Sources for ARAP1-AS1 Gene