Free for academic non-profit institutions. Other users need a Commercial license

Aliases for APOOP4 Gene

Aliases for APOOP4 Gene

  • Apolipoprotein O Pseudogene 4 2 3 5

External Ids for APOOP4 Gene

Previous GeneCards Identifiers for APOOP4 Gene

  • GC04M069169

Summaries for APOOP4 Gene

GeneCards Summary for APOOP4 Gene

APOOP4 (Apolipoprotein O Pseudogene 4) is a Pseudogene.

Additional gene information for APOOP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for APOOP4 Gene

Genomics for APOOP4 Gene

GeneHancer (GH) Regulatory Elements for APOOP4 Gene

Promoters and enhancers for APOOP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J068344 Enhancer 0.7 Ensembl dbSUPER 4.9 -40.0 -40035 1.2 ZNF121 TEAD4 CBFA2T3 ZBTB33 MLLT1 APOOP4 TMPRSS11BNL YTHDC1
GH04J068346 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 0.3 -43.8 -43822 5.2 HDGF PKNOX1 CLOCK FOXA2 SMAD1 ARID4B SIN3A DMAP1 ZNF2 IRF4 YTHDC1 CENPC UBA6 ENSG00000270257 UGT2B29P TMPRSS11BNL APOOP4
GH04J068343 Enhancer 0.4 Ensembl dbSUPER 0.3 -38.1 -38135 0.2 YTHDC1 APOOP4
GH04J068341 Enhancer 0.3 dbSUPER 0.3 -37.1 -37067 1 RFX1 YTHDC1 APOOP4
GH04J068334 Enhancer 0.2 dbSUPER 0.3 -29.6 -29565 0.8 YTHDC1 APOOP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around APOOP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for APOOP4 Gene

Genomic Locations for APOOP4 Gene
chr4:68,304,168-68,304,966
(GRCh38/hg38)
Size:
799 bases
Orientation:
Minus strand
chr4:69,169,920-69,170,684
(GRCh37/hg19)
Size:
765 bases
Orientation:
Minus strand

Genomic View for APOOP4 Gene

Genes around APOOP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
APOOP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for APOOP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for APOOP4 Gene

Function for APOOP4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for APOOP4 Gene

Localization for APOOP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for APOOP4 Gene

Pathways & Interactions for APOOP4 Gene

SuperPathways for APOOP4 Gene

No Data Available

Interacting Proteins for APOOP4 Gene

Gene Ontology (GO) - Biological Process for APOOP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for APOOP4 Gene

Drugs & Compounds for APOOP4 Gene

No Compound Related Data Available

Transcripts for APOOP4 Gene

mRNA/cDNA for APOOP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for APOOP4 Gene

No ASD Table

Relevant External Links for APOOP4 Gene

GeneLoc Exon Structure for
APOOP4
ECgene alternative splicing isoforms for
APOOP4

Expression for APOOP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for APOOP4 Gene

mRNA differential expression in normal tissues according to GTEx for APOOP4 Gene

This gene is overexpressed in Pituitary (x34.4), Testis (x6.1), and Esophagus - Mucosa (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of APOOP4 Gene:

APOOP4
genes like me logo Genes that share expression patterns with APOOP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for APOOP4 Gene

Orthologs for APOOP4 Gene

Evolution for APOOP4 Gene

ENSEMBL:
Gene Tree for APOOP4 (if available)
TreeFam:
Gene Tree for APOOP4 (if available)

No data available for Orthologs for APOOP4 Gene

Paralogs for APOOP4 Gene

No data available for Paralogs for APOOP4 Gene

Variants for APOOP4 Gene

Additional Variant Information for APOOP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
APOOP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for APOOP4 Gene

Disorders for APOOP4 Gene

No disorders were found for APOOP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for APOOP4 Gene

Publications for APOOP4 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58

Products for APOOP4 Gene

Sources for APOOP4 Gene

Content
Loading form....