Aliases for AP000818.4 Gene

Subcategory (RNA class) for AP000818.4 Gene

snoRNA

Number of RNA Genes sources:

2 / 17

Aliases for AP000818.4 Gene

  • AP000818.4 170
  • SNODB1422 177

No data available for External Ids for AP000818.4 Gene

Summaries for AP000818.4 Gene

GeneCards Summary for AP000818.4 Gene

AP000818.4 is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for AP000818.4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AP000818.4 Gene

Genomics for AP000818.4 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AP000818.4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J124143 Enhancer 0.2 Ensembl 600.7 -0.1 -122 0.4 AP000818.4 VWA5A OR10D3
GH11J124114 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 -28.1 -28113 2.4 REST ZNF512 JUND FOXA1 POLR2A SP1 DPF2 HDAC1 GABPA SOX6 VWA5A AP000818.4 OR10D3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AP000818.4 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AP000818.4 Gene

Genomic Locations for AP000818.4 Gene
chr11:124,143,923-124,144,015
(GRCh38/hg38)
Size:
93 bases
Orientation:
Plus strand

Genomic View for AP000818.4 Gene

Genes around AP000818.4 on UCSC Golden Path with GeneCards custom track
AP000818.4 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AP000818.4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AP000818.4 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AP000818.4 Gene

Proteins for AP000818.4 Gene

Post-translational modifications for AP000818.4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AP000818.4 Gene

Domains & Families for AP000818.4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AP000818.4 Gene

Function for AP000818.4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AP000818.4 Gene

Localization for AP000818.4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AP000818.4 Gene

Pathways & Interactions for AP000818.4 Gene

PathCards logo

SuperPathways for AP000818.4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AP000818.4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AP000818.4 Gene

Drugs & Compounds for AP000818.4 Gene

No Compound Related Data Available

Transcripts for AP000818.4 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AP000818.4 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000082DD93_9606 snoRNA 93 2

snoDB: SNODB1422,

snOPY: Homo_sapiens300756,

AP000818.4 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AP000818.4 Gene

No ASD Table

Relevant External Links for AP000818.4 Gene

GeneLoc Exon Structure for
AP000818.4

No data available for mRNA/cDNA for AP000818.4 Gene

Expression for AP000818.4 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AP000818.4 Gene

Orthologs for AP000818.4 Gene

No data available for Orthologs and Evolution for AP000818.4 Gene

Paralogs for AP000818.4 Gene

No data available for Paralogs for AP000818.4 Gene

Variants for AP000818.4 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AP000818.4 Gene

Disorders for AP000818.4 Gene

No disorders were found for AP000818.4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AP000818.4 Gene

Publications for AP000818.4 Gene

No publications were found for AP000818.4 Gene.

No data available for Mastermind for AP000818.4 Gene

Products for AP000818.4 Gene

Sources for AP000818.4 Gene