Aliases for AOC4P Gene

Aliases for AOC4P Gene

  • Amine Oxidase Copper Containing 4, Pseudogene 2 3 5
  • Ubiquitin-Like Plant Homeodomain (PHD) And Really Interesting New Gene (RING) Finger Domain-Containing Protein 1 (UHRF1) Protein Associated Transcript 2 3
  • UPAT 2 3
  • Amine Oxidase, Copper Containing 3 (Vascular Adhesion Protein 1) Pseudogene 3
  • Amine Oxidase Pseudogene 3
  • AOC4P 5
  • AOC4 3

External Ids for AOC4P Gene

Previous GeneCards Identifiers for AOC4P Gene

  • GC17P041017

Summaries for AOC4P Gene

GeneCards Summary for AOC4P Gene

AOC4P (Amine Oxidase Copper Containing 4, Pseudogene) is a Pseudogene. Diseases associated with AOC4P include Colorectal Cancer and Hepatocellular Carcinoma.

Additional gene information for AOC4P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AOC4P Gene

Genomics for AOC4P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AOC4P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J042867 Enhancer 1 Ensembl ENCODE 600.7 +1.5 1468 1.6 GATAD2A SOX13 NFKBIZ RCOR2 RXRB SP1 GABPA CEBPA TCF7 FOXA2 AOC4P lnc-AOC3-2 lnc-AOC3-4 LINC00671 AOC3 G6PC
GH17J042865 Enhancer 0.9 Ensembl ENCODE 600.7 -0.1 -80 0.3 GATAD2A RBFOX2 RXRB SP1 ZNF341 CEBPA SOX13 ATF3 YY1 MAX AOC4P lnc-AOC3-2 AOC3 G6PC
GH17J042864 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 600.7 -1.3 -1255 1.3 ATF7 RBFOX2 SP1 ZBTB48 ATF2 ZNF366 HNF4A RXRA IKZF1 AOC4P lnc-AOC3-2 AOC3 G6PC
GH17J042850 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE dbSUPER 11.7 -13.5 -13483 3.5 GATAD2A IKZF1 RCOR2 RXRB GABPA MNT SOX13 KDM6A NR2F2 SAP130 AOC3 AOC4P MEOX1 AOC2 lnc-AOC3-2 G6PC
GH17J042772 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 7 -91.5 -91508 4 SP1 HNRNPL GATAD2A PRDM10 ZNF629 TFE3 SIX5 LEF1 IKZF1 NFKBIZ VPS25 lnc-COA3-3 ENSG00000267681 ENSG00000267758 DHX8 LINC00910 NAGLU NBR2 NKIRAS2 CNTNAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AOC4P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AOC4P Gene

Genomic Locations for AOC4P Gene
chr17:42,865,922-42,874,369
(GRCh38/hg38)
Size:
8,448 bases
Orientation:
Plus strand
chr17:41,017,939-41,026,386
(GRCh37/hg19)
Size:
8,448 bases
Orientation:
Plus strand

Genomic View for AOC4P Gene

Genes around AOC4P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AOC4P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AOC4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AOC4P Gene

Proteins for AOC4P Gene

No data available for DME Specific Peptides for AOC4P Gene

Domains & Families for AOC4P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AOC4P Gene

Function for AOC4P Gene

Phenotypes From GWAS Catalog for AOC4P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AOC4P Gene

Localization for AOC4P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AOC4P Gene

Pathways & Interactions for AOC4P Gene

PathCards logo

SuperPathways for AOC4P Gene

No Data Available

Gene Ontology (GO) - Biological Process for AOC4P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AOC4P Gene

Drugs & Compounds for AOC4P Gene

No Compound Related Data Available

Transcripts for AOC4P Gene

mRNA/cDNA for AOC4P Gene

2 NCBI additional mRNA sequence :
6 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for AOC4P Gene

No ASD Table

Relevant External Links for AOC4P Gene

GeneLoc Exon Structure for
AOC4P

Expression for AOC4P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for AOC4P Gene

mRNA differential expression in normal tissues according to GTEx for AOC4P Gene

This gene is overexpressed in Liver (x8.1), Artery - Tibial (x7.6), and Adipose - Subcutaneous (x5.1).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for AOC4P

genes like me logo Genes that share expression patterns with AOC4P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AOC4P Gene

Orthologs for AOC4P Gene

Evolution for AOC4P Gene

ENSEMBL:
Gene Tree for AOC4P (if available)
TreeFam:
Gene Tree for AOC4P (if available)

No data available for Orthologs for AOC4P Gene

Paralogs for AOC4P Gene

No data available for Paralogs for AOC4P Gene

Variants for AOC4P Gene

Structural Variations from Database of Genomic Variants (DGV) for AOC4P Gene

Variant ID Type Subtype PubMed ID
esv33998 OTHER inversion 15654335
nsv1146669 OTHER inversion 26484159
nsv483009 CNV gain 15286789

Additional Variant Information for AOC4P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AOC4P

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for AOC4P Gene

Disorders for AOC4P Gene

MalaCards: The human disease database

(2) MalaCards diseases for AOC4P Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
colorectal cancer
  • crc
hepatocellular carcinoma
  • hcc
- elite association - COSMIC cancer census association via MalaCards
Search AOC4P in MalaCards View complete list of genes associated with diseases

Additional Disease Information for AOC4P

genes like me logo Genes that share disorders with AOC4P: view

No data available for UniProtKB/Swiss-Prot and Genatlas for AOC4P Gene

Publications for AOC4P Gene

  1. Long non-coding RNA AOC4P suppresses hepatocellular carcinoma metastasis by enhancing vimentin degradation and inhibiting epithelial-mesenchymal transition. (PMID: 26160837) Wang TH … Chen TC (Oncotarget 2015) 2 3
  2. Structural organization of mammalian copper-containing amine oxidase genes. (PMID: 20013028) Schwelberger HG (Inflammation research : official journal of the European Histamine Research Society ... [et al.] 2010) 2 3
  3. AOC4P suppresses viability and invasion and induces apoptosis in NSCLC cells by inhibiting the Wnt/β-catenin pathway. (PMID: 32325081) Li F … Li G (Chemico-biological interactions 2020) 3
  4. Long noncoding RNA UPAT promotes colon tumorigenesis by inhibiting degradation of UHRF1. (PMID: 26768845) Taniue K … Akiyama T (Proceedings of the National Academy of Sciences of the United States of America 2016) 3
  5. The origin of mammalian plasma amine oxidases. (PMID: 17385066) Schwelberger HG (Journal of neural transmission (Vienna, Austria : 1996) 2007) 3

Products for AOC4P Gene

Sources for AOC4P Gene