Aliases for AOAH-IT1 Gene

Subcategory (RNA class) for AOAH-IT1 Gene


Quality Score for this RNA gene is


Aliases for AOAH-IT1 Gene

  • AOAH Intronic Transcript 1 2 3 5
  • AOAH Intronic Transcript 1 (Non-Protein Coding) 2 3
  • AOAH-IT1 2 170
  • HSALNG0057277 169
  • NONHSAG047354 94

External Ids for AOAH-IT1 Gene

Previous GeneCards Identifiers for AOAH-IT1 Gene

  • GC00U933779
  • GC07M036638

Summaries for AOAH-IT1 Gene

GeneCards Summary for AOAH-IT1 Gene

AOAH-IT1 (AOAH Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for AOAH-IT1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AOAH-IT1 Gene

Genomics for AOAH-IT1 Gene

GeneHancer (GH) Regulatory Elements for AOAH-IT1 Gene

Promoters and enhancers for AOAH-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J036591 Enhancer 0.5 FANTOM5 Ensembl dbSUPER 5.8 +8.0 8019 2.2 RF00001-300 ELMO1 AOAH AOAH-IT1 EEPD1 piR-46002-526
GH07J036601 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.6 -4.1 -4081 10 RXRA SP1 ZNF629 REST ZNF692 FOS JUNB FOSL2 JUND ATF2 AOAH ELMO1 EEPD1 AOAH-IT1 piR-31199-331
GH07J036596 Enhancer 0.8 Ensembl dbSUPER 0.6 +2.4 2420 1.8 MAFK CBFA2T2 REST ZNF512 ZNF316 NFE2 MAFG FOXA1 NCOR1 FOSL2 AOAH-IT1 RF00001-300 AOAH
GH07J036613 Enhancer 0.6 Ensembl dbSUPER 0.4 -13.0 -12981 3 IKZF1 IKZF2 DPF2 RUNX3 ZFP69B AOAH-IT1 piR-31199-331 AOAH
GH07J036637 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.3 -40.0 -39981 6.6 ZBTB40 CTBP1 NFIB PKNOX1 SCRT2 NFIC GLIS1 piR-31199-331 lnc-ELMO1-1 AOAH-IT1 AOAH
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AOAH-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AOAH-IT1 Gene

Genomic Locations for AOAH-IT1 Gene
2,287 bases
Minus strand
2,287 bases
Minus strand

Genomic View for AOAH-IT1 Gene

Genes around AOAH-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AOAH-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AOAH-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AOAH-IT1 Gene

Proteins for AOAH-IT1 Gene

Post-translational modifications for AOAH-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AOAH-IT1 Gene

Domains & Families for AOAH-IT1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AOAH-IT1 Gene

Function for AOAH-IT1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AOAH-IT1 Gene

Localization for AOAH-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AOAH-IT1 Gene

Pathways & Interactions for AOAH-IT1 Gene

PathCards logo

SuperPathways for AOAH-IT1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AOAH-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for AOAH-IT1 Gene

Drugs & Compounds for AOAH-IT1 Gene

No Compound Related Data Available

Transcripts for AOAH-IT1 Gene

mRNA/cDNA for AOAH-IT1 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :
(1) LncBook transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for AOAH-IT1 Gene

No ASD Table

Relevant External Links for AOAH-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for AOAH-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AOAH-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for AOAH-IT1 Gene

This gene is overexpressed in Whole Blood (x45.1).

SOURCE GeneReport for Unigene cluster for AOAH-IT1 Gene:

genes like me logo Genes that share expression patterns with AOAH-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AOAH-IT1 Gene

Orthologs for AOAH-IT1 Gene

Evolution for AOAH-IT1 Gene

Gene Tree for AOAH-IT1 (if available)
Gene Tree for AOAH-IT1 (if available)

No data available for Orthologs for AOAH-IT1 Gene

Paralogs for AOAH-IT1 Gene

No data available for Paralogs for AOAH-IT1 Gene

Variants for AOAH-IT1 Gene

Sequence variations from dbSNP and Humsavar for AOAH-IT1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000018486 -- 36,601,755(-) T/A upstream_transcript_variant
rs1000615593 -- 36,601,138(-) T/G upstream_transcript_variant
rs1001610892 -- 36,599,519(-) A/C intron_variant
rs1002655933 -- 36,602,118(-) A/C upstream_transcript_variant
rs1003915225 -- 36,601,373(-) G/A/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for AOAH-IT1 Gene

Variant ID Type Subtype PubMed ID
nsv1032157 CNV gain 25217958
nsv464427 CNV loss 19166990
nsv606618 CNV loss 21841781
nsv830957 CNV gain 17160897
nsv830958 CNV gain 17160897

Additional Variant Information for AOAH-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for AOAH-IT1 Gene

Disorders for AOAH-IT1 Gene

Additional Disease Information for AOAH-IT1

No disorders were found for AOAH-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AOAH-IT1 Gene

Publications for AOAH-IT1 Gene

No publications were found for AOAH-IT1 Gene.

Products for AOAH-IT1 Gene

Sources for AOAH-IT1 Gene