ANXA2P3 Gene (Pseudogene)

Annexin A2 Pseudogene 3

GC10P064825
GIFtS:
11
See more...

Aliases for ANXA2P3 Gene

Aliases for ANXA2P3 Gene

  • Annexin A2 Pseudogene 3 2 3 5
  • LIP2 2 3
  • Annexin II (Lipocortin II) Pseudogene 3 3
  • ANXA2P3 5
  • ANX2L3 3
  • ANX2P3 3
  • LPC2C 3

External Ids for ANXA2P3 Gene

Previous HGNC Symbols for ANXA2P3 Gene

  • ANX2P3
  • ANX2L3
  • LPC2C

Previous GeneCards Identifiers for ANXA2P3 Gene

  • GC10U990004
  • GC10P065929
  • GC10P066255
  • GC10P066586
  • GC10P060577

Summaries for ANXA2P3 Gene

GeneCards Summary for ANXA2P3 Gene

ANXA2P3 (Annexin A2 Pseudogene 3) is a Pseudogene.

Additional gene information for ANXA2P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ANXA2P3 Gene

Genomics for ANXA2P3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data

Top Transcription factor binding sites by QIAGEN in the ANXA2P3 gene promoter:
  • AREB6
  • FOXI1
  • HFH-3
  • HNF-4alpha1
  • HNF-4alpha2
  • HTF
  • p53
  • SREBP-1a
  • SREBP-1b
  • SREBP-1c

Genomic Locations for ANXA2P3 Gene

Genomic Locations for ANXA2P3 Gene
chr10:64,825,528-64,826,877
(GRCh38/hg38)
Size:
1,350 bases
Orientation:
Plus strand
chr10:66,585,285-66,586,634
(GRCh37/hg19)
Size:
1,350 bases
Orientation:
Plus strand

Genomic View for ANXA2P3 Gene

Genes around ANXA2P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANXA2P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANXA2P3 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ANXA2P3 Gene

Proteins for ANXA2P3 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ANXA2P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANXA2P3 Gene

Domains & Families for ANXA2P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ANXA2P3 Gene

Function for ANXA2P3 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Molecular function for ANXA2P3 Gene

GENATLAS Biochemistry:
annexin A2,pseudogene 3

Phenotypes From GWAS Catalog for ANXA2P3 Gene

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANXA2P3 Gene

Localization for ANXA2P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANXA2P3 Gene

Pathways & Interactions for ANXA2P3 Gene

PathCards logo

SuperPathways for ANXA2P3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANXA2P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ANXA2P3 Gene

Drugs & Compounds for ANXA2P3 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ANXA2P3 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ANXA2P3 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANXA2P3 Gene

No ASD Table

Relevant External Links for ANXA2P3 Gene

GeneLoc Exon Structure for
ANXA2P3

Expression for ANXA2P3 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ANXA2P3 Gene

mRNA expression in normal human tissues for ANXA2P3 Gene
mRNA expression by GTEx for ANXA2P3 GenemRNA expression by BioGPS for ANXA2P3 Gene

mRNA differential expression in normal tissues according to GTEx for ANXA2P3 Gene

This gene is overexpressed in Brain - Cortex (x9.0), Brain - Cerebellum (x8.5), Brain - Cerebellar Hemisphere (x8.0), Brain - Frontal Cortex (BA9) (x7.8), and Brain - Nucleus accumbens (basal ganglia) (x4.3).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ANXA2P3

SOURCE GeneReport for Unigene cluster for ANXA2P3 Gene:

Hs.591361
genes like me logo Genes that share expression patterns with ANXA2P3: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANXA2P3 Gene

Orthologs for ANXA2P3 Gene

Evolution for ANXA2P3 Gene

ENSEMBL:
Gene Tree for ANXA2P3 (if available)
TreeFam:
Gene Tree for ANXA2P3 (if available)

No data available for Orthologs for ANXA2P3 Gene

Paralogs for ANXA2P3 Gene

No data available for Paralogs for ANXA2P3 Gene

Variants for ANXA2P3 Gene

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  1. SNP Genotyping and Copy Number Assay

Structural Variations from Database of Genomic Variants (DGV) for ANXA2P3 Gene

Variant ID Type Subtype PubMed ID
esv3578945 CNV loss 25503493
esv3891832 CNV gain 25118596
esv3891833 CNV gain 25118596
nsv1050207 CNV gain 25217958
nsv551189 CNV gain 21841781
nsv948037 CNV duplication 23825009

Additional Variant Information for ANXA2P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANXA2P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for ANXA2P3 Gene

Disorders for ANXA2P3 Gene

Additional Disease Information for ANXA2P3

Genetic Association Database
(GAD)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for ANXA2P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANXA2P3 Gene

Publications for ANXA2P3 Gene

  1. Characterization of the human lipocortin-2-encoding multigene family: its structure suggests the existence of a short amino acid unit undergoing duplication. (PMID: 2174397) Spano F … Melli M (Gene 1990) 2 3
  2. Role of the long non‑coding RNA‑Annexin A2 pseudogene 3/Annexin A2 signaling pathway in biliary atresia‑associated hepatic injury. (PMID: 30569159) Nuerzhati Y … Zheng S (International journal of molecular medicine 2019) 3
  3. Genome-wide association of lipid-lowering response to statins in combined study populations. (PMID: 20339536) Barber MJ … Krauss RM (PloS one 2010) 3
  4. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 41

ExternalLinks

View latest publications for ANXA2P3 gene in Mastermind

Products for ANXA2P3 Gene

Sources for ANXA2P3 Gene