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ANXA2P3 Gene(Pseudogene)

Annexin A2 Pseudogene 3

GCID:
GC10P064825
GIFtS:
16
Genes Participants
UDN Logo

Aliases for ANXA2P3 Gene

Aliases for ANXA2P3 Gene

  • Annexin A2 Pseudogene 3 2 3 5
  • Annexin II (Lipocortin II) Pseudogene 3 3
  • ANX2L3 3
  • ANX2P3 3
  • LPC2C 3
  • LIP2 3

External Ids for ANXA2P3 Gene

Previous HGNC Symbols for ANXA2P3 Gene

  • ANX2P3
  • ANX2L3
  • LPC2C

Previous GeneCards Identifiers for ANXA2P3 Gene

  • GC10U990004
  • GC10P065929
  • GC10P066255
  • GC10P066586
  • GC10P060577

Summaries for ANXA2P3 Gene

GeneCards Summary for ANXA2P3 Gene

ANXA2P3 (Annexin A2 Pseudogene 3) is a Pseudogene.

Additional gene information for ANXA2P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANXA2P3 Gene

Genomics for ANXA2P3 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for ANXA2P3 Gene

Promoters and enhancers for ANXA2P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH10J064771 Enhancer 0.4 ENCODE 0.2 -53.5 -53496 1.3 RCOR1 CHD2 CYP2C61P GC10P064734 ANXA2P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ANXA2P3 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the ANXA2P3 gene promoter:
  • SREBP-1c
  • SREBP-1b
  • SREBP-1a
  • p53
  • AREB6
  • FOXI1
  • HNF-4alpha1
  • HNF-4alpha2
  • HFH-3
  • HTF

Genomic Locations for ANXA2P3 Gene

Genomic Locations for ANXA2P3 Gene
chr10:64,825,528-64,826,877
(GRCh38/hg38)
Size:
1,350 bases
Orientation:
Plus strand
chr10:66,585,285-66,586,634
(GRCh37/hg19)
Size:
1,350 bases
Orientation:
Plus strand

Genomic View for ANXA2P3 Gene

Genes around ANXA2P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANXA2P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANXA2P3 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ANXA2P3 Gene

Proteins for ANXA2P3 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ANXA2P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANXA2P3 Gene

Domains & Families for ANXA2P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANXA2P3 Gene

Function for ANXA2P3 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Molecular function for ANXA2P3 Gene

GENATLAS Biochemistry:
annexin A2,pseudogene 3

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANXA2P3 Gene

Localization for ANXA2P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANXA2P3 Gene

Pathways & Interactions for ANXA2P3 Gene

SuperPathways for ANXA2P3 Gene

PathCards logo More details on SuperPathways for ANXA2P3
No Data Available

Interacting Proteins for ANXA2P3 Gene

Gene Ontology (GO) - Biological Process for ANXA2P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANXA2P3 Gene

Drugs & Compounds for ANXA2P3 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ANXA2P3 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ANXA2P3 Gene

(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANXA2P3 Gene

Annexin A2 pseudogene 3:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANXA2P3 Gene

No ASD Table

Relevant External Links for ANXA2P3 Gene

GeneLoc Exon Structure for
ANXA2P3
ECgene alternative splicing isoforms for
ANXA2P3

Expression for ANXA2P3 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANXA2P3 Gene

mRNA expression in normal human tissues for ANXA2P3 Gene
mRNA expression by GTEx for ANXA2P3 GenemRNA expression by BioGPS for ANXA2P3 Gene

mRNA differential expression in normal tissues according to GTEx for ANXA2P3 Gene

This gene is overexpressed in Brain - Cortex (x9.0), Brain - Cerebellum (x8.5), Brain - Cerebellar Hemisphere (x8.0), Brain - Frontal Cortex (BA9) (x7.8), and Brain - Nucleus accumbens (basal ganglia) (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of ANXA2P3 Gene:

ANXA2P3

SOURCE GeneReport for Unigene cluster for ANXA2P3 Gene:

Hs.591361
genes like me logo Genes that share expression patterns with ANXA2P3: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANXA2P3 Gene

Orthologs for ANXA2P3 Gene

Evolution for ANXA2P3 Gene

ENSEMBL:
Gene Tree for ANXA2P3 (if available)
TreeFam:
Gene Tree for ANXA2P3 (if available)

No data available for Orthologs for ANXA2P3 Gene

Paralogs for ANXA2P3 Gene

No data available for Paralogs for ANXA2P3 Gene

Variants for ANXA2P3 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Sequence variations from dbSNP and Humsavar for ANXA2P3 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000282971 -- 64,823,887(+) G/A upstream_transcript_variant
rs1001069538 -- 64,827,023(+) G/A downstream_transcript_variant
rs1001518196 -- 64,824,529(+) G/A upstream_transcript_variant
rs1001689866 -- 64,825,947(+) A/T non_coding_transcript_variant
rs1002124706 -- 64,827,087(+) T/C downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ANXA2P3 Gene

Variant ID Type Subtype PubMed ID
nsv948037 CNV duplication 23825009
nsv551189 CNV gain 21841781
nsv1050207 CNV gain 25217958
esv3891833 CNV gain 25118596
esv3891832 CNV gain 25118596
esv3578945 CNV loss 25503493

Additional Variant Information for ANXA2P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANXA2P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANXA2P3 Gene

Disorders for ANXA2P3 Gene

Additional Disease Information for ANXA2P3

Genetic Association Database
(GAD)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for ANXA2P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANXA2P3 Gene

Publications for ANXA2P3 Gene

  1. Characterization of the human lipocortin-2-encoding multigene family: its structure suggests the existence of a short amino acid unit undergoing duplication. (PMID: 2174397) Spano F … Melli M (Gene 1990) 2 3 58
  2. Genome-wide association of lipid-lowering response to statins in combined study populations. (PMID: 20339536) Barber MJ … Krauss RM (PloS one 2010) 3 58
  3. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 44 58

Products for ANXA2P3 Gene

Sources for ANXA2P3 Gene

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