Aliases for ANXA2P1 Gene

Aliases for ANXA2P1 Gene

  • Annexin A2 Pseudogene 1 2 3 5
  • Annexin II (Lipocortin II) Pseudogene 1 3
  • ANX2L1 3
  • ANX2P1 3
  • LPC2A 3

External Ids for ANXA2P1 Gene

Previous HGNC Symbols for ANXA2P1 Gene

  • LPC2A
  • ANX2P1
  • ANX2L1

Previous GeneCards Identifiers for ANXA2P1 Gene

  • GC04U990005
  • GC04M154806
  • GC04M154586
  • GC04M154448
  • GC04M154229
  • GC04M149958

Summaries for ANXA2P1 Gene

GeneCards Summary for ANXA2P1 Gene

ANXA2P1 (Annexin A2 Pseudogene 1) is a Pseudogene.

Additional gene information for ANXA2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ANXA2P1 Gene

Genomics for ANXA2P1 Gene

GeneHancer (GH) Regulatory Elements for ANXA2P1 Gene

Promoters and enhancers for ANXA2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J153292 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +13.3 13281 4.7 EGR1 CREB1 CTCF PKNOX1 GATA3 GLIS1 TRIM2 ANXA2P1 ENSG00000201786
GH04J153263 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +40.5 40510 7.4 FOXA1 SP1 MAFK SP7 PKNOX1 CREB1 RNF2 RXRA ZEB2 FOXA2 ENSG00000201786 KY994054-045 TRIM2 MND1 RNU6-1196P RF00026-831 ANXA2P1
GH04J153341 Enhancer 0.9 Ensembl ENCODE 0.3 -33.2 -33190 1.6 ZBTB40 SMARCE1 L3MBTL2 TEAD4 SMARCA4 IKZF1 ATF1 IKZF2 PKNOX1 HDAC1 MND1 ANXA2P1
GH04J153273 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 +33.4 33380 3.8 SP1 MAFK ZNF316 SCRT2 SCRT1 MAFG HNF4A HNF4G TRIM2 MND1 ENSG00000201786 ANXA2P1
GH04J153327 Enhancer 0.7 FANTOM5 Ensembl 0.4 -18.1 -18109 1 ZNF316 SCRT2 FOXA1 FOS JUND TRIM2 RNF175 TMEM131L ANXA2P1 MND1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ANXA2P1 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the ANXA2P1 gene promoter:
  • AML1a
  • AREB6
  • HOXA9
  • HOXA9B
  • HTF
  • Meis-1
  • SEF-1 (1)
  • SREBP-1a
  • SREBP-1b
  • SREBP-1c

Genomic Locations for ANXA2P1 Gene

Genomic Locations for ANXA2P1 Gene
chr4:153,307,469-153,308,811
(GRCh38/hg38)
Size:
1,343 bases
Orientation:
Minus strand
chr4:154,228,621-154,229,963
(GRCh37/hg19)
Size:
1,343 bases
Orientation:
Minus strand

Genomic View for ANXA2P1 Gene

Genes around ANXA2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANXA2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANXA2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANXA2P1 Gene

Proteins for ANXA2P1 Gene

Post-translational modifications for ANXA2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANXA2P1 Gene

Domains & Families for ANXA2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ANXA2P1 Gene

Function for ANXA2P1 Gene

Molecular function for ANXA2P1 Gene

GENATLAS Biochemistry:
annexin A2,pseudogene 1

Phenotypes From GWAS Catalog for ANXA2P1 Gene

Phenotypes for ANXA2P1 Gene

genes like me logo Genes that share phenotypes with ANXA2P1: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANXA2P1 Gene

Localization for ANXA2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANXA2P1 Gene

Pathways & Interactions for ANXA2P1 Gene

PathCards logo

SuperPathways for ANXA2P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANXA2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANXA2P1 Gene

Drugs & Compounds for ANXA2P1 Gene

No Compound Related Data Available

Transcripts for ANXA2P1 Gene

mRNA/cDNA for ANXA2P1 Gene

(1) Additional mRNA sequences :
(7) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANXA2P1 Gene

No ASD Table

Relevant External Links for ANXA2P1 Gene

GeneLoc Exon Structure for
ANXA2P1
ECgene alternative splicing isoforms for
ANXA2P1

Expression for ANXA2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANXA2P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of ANXA2P1 Gene:

ANXA2P1

SOURCE GeneReport for Unigene cluster for ANXA2P1 Gene:

Hs.546235
genes like me logo Genes that share expression patterns with ANXA2P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANXA2P1 Gene

Orthologs for ANXA2P1 Gene

Evolution for ANXA2P1 Gene

ENSEMBL:
Gene Tree for ANXA2P1 (if available)
TreeFam:
Gene Tree for ANXA2P1 (if available)

No data available for Orthologs for ANXA2P1 Gene

Paralogs for ANXA2P1 Gene

No data available for Paralogs for ANXA2P1 Gene

Variants for ANXA2P1 Gene

Sequence variations from dbSNP and Humsavar for ANXA2P1 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000093552 -- 153,310,326(-) A/G upstream_transcript_variant
rs1000448185 -- 153,310,686(-) G/A upstream_transcript_variant
rs1001121499 -- 153,308,832(-) T/C upstream_transcript_variant
rs1001342442 -- 153,309,581(-) A/G upstream_transcript_variant
rs1002625432 -- 153,308,540(-) A/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ANXA2P1 Gene

Variant ID Type Subtype PubMed ID
nsv966329 CNV duplication 23825009

Additional Variant Information for ANXA2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANXA2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANXA2P1 Gene

Disorders for ANXA2P1 Gene

Additional Disease Information for ANXA2P1

No disorders were found for ANXA2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANXA2P1 Gene

Publications for ANXA2P1 Gene

  1. Localization of the 5' end of the MCF2 oncogene to human chromosome 15q15----q23. (PMID: 1611909) Galland F … Birnbaum D (Cytogenetics and cell genetics 1992) 2 3 56
  2. Characterization of the human lipocortin-2-encoding multigene family: its structure suggests the existence of a short amino acid unit undergoing duplication. (PMID: 2174397) Spano F … Melli M (Gene 1990) 2 3 56

Products for ANXA2P1 Gene

Sources for ANXA2P1 Gene